| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0775 |
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| Symbol | prfA |
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| ID | 4689933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 816371 |
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| End bp | 817492 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639833771 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_981015 |
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| Protein GI | 121603686 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0952955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCT TTCTTCGCCA CACCCTGGAC CGCCAGCTCC TGCGCCTGCA TGAGCTGGAC
GCCCTGCTGT CCGCCAGCGA CGTGGTCAGC GACCTGGACC GCTTTCGCGC CCTGACCCGC
GAACACGCCG AGGCCAGCGT CGTGGCCGAG CAGTACAACC GCCTCACCGC CCGCGAGGCC
GACCTGGCCA GCGCCGAAAG CATGCTGGCC GAGGCCAAGA ACGACCCGGA CATGGCGGAA
ATGGCCGAAG AGGAAATCAA CGCCGCCAAA ACCGATATCG CGCAACTCGA TGAAGCGCTG
CAGCTGATGC TGATTCCGAA AGACCCGGAC GACAGGCGGG CGGCCTTCAT TGAAATCCGC
GCTGGCACGG GCGGCGACGA ATCGGCGCTG TTCGCTGGCG ACCTGTTTCG CCTCTACACC
CGCTTTGCCG AGCGCAAGCG CTGGCAGGTC GAGATCATCA GCGAGTCGCC GAGCGAGCTG
GGCGGCTACA AGGAAGTGGT GCTGCGCATC GACGGTCCGA CCGATGCCAT GGGCGTGGGC
GTGTATGGCA AGCTGCGCTT CGAGTCGGGC GGCCACCGCG TGCAGCGCGT GCCGGCGACC
GAAACCCAGG GCCGCATCCA CACCAGCGCC TGCACCGTGG CCGTGCTGCC GGAGCCCGAT
GAAACCGTCG CCATCCAGAT CAACCCCGCC GACCTGCGCA TCGACACCTA CCGCGCCAGC
GGCGCCGGCG GCCAGCACAT CAACAAGACG GATTCGGCCG TGCGCATCAC GCACCTTCCG
ACCGGCATCG TCGCCGAATG CCAGGAGGGC CGCAGCCAGC ACGGCAACAA GGCCCAGGCG
ATGAAGGTGC TGACGGCGCG CATCCATGAA AAAGAACGCT CAGCCCAGGC CGCCAAGGAT
GCGGCGATGC GCAAGGGCCT GATCGGCAGC GGCGACCGCA GCGACCGCAT CCGCACCTAC
AACTTCCCGC AGGGGCGGCT GACCGACCAC CGCATCAACC TGACGCTGTA CAAGCTCTTG
ACCATCATGG AAGGCGACCT GGACGATGTC GTCACGGCGC TGCAGGTGGC GCGCGGCGCC
GAGCAATTGA ACGAGCTGGA AACGGCGAAC AACGGCGGCT GA
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| Protein sequence | MKPFLRHTLD RQLLRLHELD ALLSASDVVS DLDRFRALTR EHAEASVVAE QYNRLTAREA
DLASAESMLA EAKNDPDMAE MAEEEINAAK TDIAQLDEAL QLMLIPKDPD DRRAAFIEIR
AGTGGDESAL FAGDLFRLYT RFAERKRWQV EIISESPSEL GGYKEVVLRI DGPTDAMGVG
VYGKLRFESG GHRVQRVPAT ETQGRIHTSA CTVAVLPEPD ETVAIQINPA DLRIDTYRAS
GAGGQHINKT DSAVRITHLP TGIVAECQEG RSQHGNKAQA MKVLTARIHE KERSAQAAKD
AAMRKGLIGS GDRSDRIRTY NFPQGRLTDH RINLTLYKLL TIMEGDLDDV VTALQVARGA
EQLNELETAN NGG
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