| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0726 |
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| Symbol | |
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| ID | 4687708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 767334 |
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| End bp | 768983 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639833721 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_980966 |
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| Protein GI | 121603637 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0623502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGCA GCGACGCCAC CAATCCGAAA TCGGTATTGA GTTCGGGAAT CGGCACGCAA
GGTCAACGGC ATTCGCCGCT GACGGCCGTC AACCCCAAAA CCATCAGCCG GCTGACGCCC
GTATGGTCCA TGTCCTTTGG CGGTGAAAAG CAGCGTGGCC AGGAGTCGCA ACCCCTTGTC
TATAACGGCA AGATGTTCGT GACCGCCTCG TATTCGCGCA TGTATGCGCT GGATGTCAAG
ACCGGCCAGA AGCTCTGGAA ATACGAGCAC CGGCTGCCCG AAGGCATCAT GCCTTGCTGC
GATGTGGTCA ACCGTGGCGC CGCGCTGTAC GACAACCTGG TGATCTTCGC GACCCTGGAT
GCCCAGTTGG TGGCGCTTGA CCAGAACACC GGCAAAGTGG TCTGGAAAGA AAAAATCGAC
GACTACAGCG CGGGCTACAG TGCCACCGCA GCCCCCCTGA TTGCTGAAGG CTTGCTGCTG
ACCGGGCTCT CGGGCGGCGA ATTCGGCGTG GTAGGCCGCG TTGAAGCGCG CGATCCCAAG
ACCGGCAAGC TGGTCTGGTC CCGTCCCACG GTCGAAGGCC ACATGGGCTA CCTGAACGGC
AAGGAAAACG GCATCAGCGG CACGACCAAC GCCACCTGGC CCGGCGAAAC CTGGAAAACC
GGCGGCGCTT CCACCTGGAT GGGCGGCACC TACGATGCCA AGACCGGCCT GGCCTATTTC
GGCACCGGCA ACCCGGGTCC GTGGAACAGC CATGTGCGCA AGGGCGACAA CCTGTATTCC
TCGTCCACCG TGGCAATTGA TGTCAAGACC GGGAAAATCG CCTGGAGCTA TCAAAACACG
CCGAATGACG CCTGGGACTT TGACGGCTCG AACGAGTTCG TGACCTTCGA CATGGACGGC
AAGCGCATGG GCGCAAAGGC CGACCGCAAT GGCTTTTTCT ATGTGATTGA CGCCACCACC
GGCAAGCTGG GCAATGCGTT CCCGTTCGTC AAGAAGATCA CCTGGGCCAC CGACATCGAC
CTGAAAACCG GCCGTCCCAA CTTCGTGGCC GACAACCGGC CAGGCGACCC GACGGCTCCC
GGCGGTGAAG GCACCAAGGG CAAGTCGGTG TTTTCCGCAC CCGCCTTCCT GGGCGCAAAG
AACCAGATGC CGATGGCCTA CAGCCCTCTG ACCAAGCTGT TCTATGTGCC GACGAACGAG
TGGGGCATGG AAATCTGGAA CGAACCCATC ACCTATAAAA AAGGCGGCGC TTTCCTGGGT
GCGGGCTTCA CGATCAAGCC TTTGTTTGAA GACCATATTG GCTCATTGCG CGCCATTGAT
CCGAAGACCG GCAAGATCGC TTGGGAAATC AAGAACACCG CGCCGCTGTG GGGCGGCGCC
TTGACCACGG CGGGCAACCT GGTTTTCTGG GGTACGCCTG AAGGTTTCCT GAAGGCCGCT
GATGCCACGA CCGGCAAGGA AGTCTGGAAG TTCCAGACCG GTTCGGGCGT GGTCGCTCCT
CCCATCACCT GGATGCAGGA TGGCGAGCAG TACATCAGCG TGGTTTCGGG CTGGGGCGGT
GCTGTACCGC TGTGGGGCGG CGAAGTGGCC AAGAAGGTCA ACTTCCTTGA GCAGGGCGGA
TCCGTCTGGA CCTTCAAGCT GATGAAGTAA
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| Protein sequence | MISSDATNPK SVLSSGIGTQ GQRHSPLTAV NPKTISRLTP VWSMSFGGEK QRGQESQPLV
YNGKMFVTAS YSRMYALDVK TGQKLWKYEH RLPEGIMPCC DVVNRGAALY DNLVIFATLD
AQLVALDQNT GKVVWKEKID DYSAGYSATA APLIAEGLLL TGLSGGEFGV VGRVEARDPK
TGKLVWSRPT VEGHMGYLNG KENGISGTTN ATWPGETWKT GGASTWMGGT YDAKTGLAYF
GTGNPGPWNS HVRKGDNLYS SSTVAIDVKT GKIAWSYQNT PNDAWDFDGS NEFVTFDMDG
KRMGAKADRN GFFYVIDATT GKLGNAFPFV KKITWATDID LKTGRPNFVA DNRPGDPTAP
GGEGTKGKSV FSAPAFLGAK NQMPMAYSPL TKLFYVPTNE WGMEIWNEPI TYKKGGAFLG
AGFTIKPLFE DHIGSLRAID PKTGKIAWEI KNTAPLWGGA LTTAGNLVFW GTPEGFLKAA
DATTGKEVWK FQTGSGVVAP PITWMQDGEQ YISVVSGWGG AVPLWGGEVA KKVNFLEQGG
SVWTFKLMK
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