Gene Pnap_0719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0719 
Symbol 
ID4689103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp760153 
End bp760896 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content60% 
IMG OID639833714 
ProductABC transporter related 
Protein accessionYP_980959 
Protein GI121603630 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.380288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA TCTTGCTGAA CGCACAAGAC CTGCACAAGT CCTACGCAGG AAAACGCGCC 
CTGCAAGGGG TAAGCCTGAG CCTGCATGAG GGCGAAATCG TCGCCTTGCT CGGACCCAAC
GGCGCCGGAA AATCAACCCT GCTGCAGCTG CTTACCGGCT TGTTCAGTCC TGACCAGGGG
CATATCCATG TCCTGGGACA CGACATGCGC ACCCAGGCCA GCCGGGCGCT GGCAGGCTTG
GGCGTGGTGT TCCAGCAAAG CGCGCTTGAC CTCGATCTGT CGGTTCAGGC CAATTTGCTG
TTTCACACCG ATCTGCATGG ATTGGCCCGA CCCCTGGCCA GGCAGCGCAT TGCCGAGGCA
CTGGAGAAGA TAGGAATGAC AGCGCAGGCC AAGGCAGTCG TGCGCAGCCT GTCTGGCGGA
ACACGCCGCA AGGTCGAACT GGTCCGTGCC CTGCTCCATC AGCCACGCGT GCTGCTGATG
GACGAAGCCA CGGCAGGGCT GGACATGGCA TCACGCCAGC AGTTGCTGAC TGCCGTGCGC
AGCCTGGCGC AGGATCAGGG CGTTGCCGTG CTGTGGGCAA CGCATCTGGC AGAAGAAGTC
AAGGTCGCAG ATCGCCTGAT CTTGCTTGAC AAGGGCATGG TGCGCTTTAG CGGCTCCACC
AGCGACTTTA TGCAAAAGGC GCAAGCAGAT GATCTGTATG CTGAGATATT CAAACACCTT
GGCCAGCCAG TGTTTGAAGC TTGA
 
Protein sequence
MTAILLNAQD LHKSYAGKRA LQGVSLSLHE GEIVALLGPN GAGKSTLLQL LTGLFSPDQG 
HIHVLGHDMR TQASRALAGL GVVFQQSALD LDLSVQANLL FHTDLHGLAR PLARQRIAEA
LEKIGMTAQA KAVVRSLSGG TRRKVELVRA LLHQPRVLLM DEATAGLDMA SRQQLLTAVR
SLAQDQGVAV LWATHLAEEV KVADRLILLD KGMVRFSGST SDFMQKAQAD DLYAEIFKHL
GQPVFEA