Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0719 |
Symbol | |
ID | 4689103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 760153 |
End bp | 760896 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639833714 |
Product | ABC transporter related |
Protein accession | YP_980959 |
Protein GI | 121603630 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.380288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCA TCTTGCTGAA CGCACAAGAC CTGCACAAGT CCTACGCAGG AAAACGCGCC CTGCAAGGGG TAAGCCTGAG CCTGCATGAG GGCGAAATCG TCGCCTTGCT CGGACCCAAC GGCGCCGGAA AATCAACCCT GCTGCAGCTG CTTACCGGCT TGTTCAGTCC TGACCAGGGG CATATCCATG TCCTGGGACA CGACATGCGC ACCCAGGCCA GCCGGGCGCT GGCAGGCTTG GGCGTGGTGT TCCAGCAAAG CGCGCTTGAC CTCGATCTGT CGGTTCAGGC CAATTTGCTG TTTCACACCG ATCTGCATGG ATTGGCCCGA CCCCTGGCCA GGCAGCGCAT TGCCGAGGCA CTGGAGAAGA TAGGAATGAC AGCGCAGGCC AAGGCAGTCG TGCGCAGCCT GTCTGGCGGA ACACGCCGCA AGGTCGAACT GGTCCGTGCC CTGCTCCATC AGCCACGCGT GCTGCTGATG GACGAAGCCA CGGCAGGGCT GGACATGGCA TCACGCCAGC AGTTGCTGAC TGCCGTGCGC AGCCTGGCGC AGGATCAGGG CGTTGCCGTG CTGTGGGCAA CGCATCTGGC AGAAGAAGTC AAGGTCGCAG ATCGCCTGAT CTTGCTTGAC AAGGGCATGG TGCGCTTTAG CGGCTCCACC AGCGACTTTA TGCAAAAGGC GCAAGCAGAT GATCTGTATG CTGAGATATT CAAACACCTT GGCCAGCCAG TGTTTGAAGC TTGA
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Protein sequence | MTAILLNAQD LHKSYAGKRA LQGVSLSLHE GEIVALLGPN GAGKSTLLQL LTGLFSPDQG HIHVLGHDMR TQASRALAGL GVVFQQSALD LDLSVQANLL FHTDLHGLAR PLARQRIAEA LEKIGMTAQA KAVVRSLSGG TRRKVELVRA LLHQPRVLLM DEATAGLDMA SRQQLLTAVR SLAQDQGVAV LWATHLAEEV KVADRLILLD KGMVRFSGST SDFMQKAQAD DLYAEIFKHL GQPVFEA
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