| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0712 |
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| Symbol | mscL |
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| ID | 4689194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 754552 |
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| End bp | 754980 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639833706 |
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| Product | large-conductance mechanosensitive channel |
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| Protein accession | YP_980952 |
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| Protein GI | 121603623 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1970] Large-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.23692 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAATGA TGCAGGAATT CAAGGAGTTC GCCATCAAGG GCAACGTGAT CGACCTGGCC
GTTGGCGTGA TCATCGGGGC GGCCTTCAGC AAGATTGTCG ACTCCGTGGT CGGCGACCTG
ATCATGCCGG TGGTCGGGGC GGTGATCGGC AAGCTGGATT TTTCCAATAT GTTCGTGGTG
CTGCGCAGCG TACCTCCGGG CATTCCCACG ACGCTTGATG CGCTGAAAAA AGCCGGCGTT
CCTGTGTTTG CCTATGGCAA CTTCATCACG GTGGCGGTCA ACTTTGCGAT CCTGGCGTTC
ATCATTTTCC TGATGGTCAA GCAGATCAAC CGGCTCAAAC GCCGCGAAGT GGTTAAACCC
ACCACGGCTC CCGCCGAAGA CATCATGCTG CTGCGGGAAA TCCGTGACAG CCTGAAAAAG
CAAGCCTGA
|
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| Protein sequence | MGMMQEFKEF AIKGNVIDLA VGVIIGAAFS KIVDSVVGDL IMPVVGAVIG KLDFSNMFVV
LRSVPPGIPT TLDALKKAGV PVFAYGNFIT VAVNFAILAF IIFLMVKQIN RLKRREVVKP
TTAPAEDIML LREIRDSLKK QA
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