Gene Pnap_0659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0659 
Symbol 
ID4688621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp699292 
End bp699978 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content63% 
IMG OID639833653 
Producthypothetical protein 
Protein accessionYP_980899 
Protein GI121603570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000868215 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00174594 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCCAGCG ATAGTCATTT TTTGAAAGAG CGCCTCGCCG AAGCGGCCCG CTATGCACTC 
ATGCGCCGGC TGCTGCCGGC CATCCGCCAT AACCTGGCCG GTTCGCTGCA GCCCATCGGC
ATGATGTCGG CCATGCTGGA ACGGCGGATC AAGTCAGCTG CGCCCGATAT GGCGCAGCTT
GGCAAGAACA CGCAGGCCCT GACCACCCTG TCCCGCGAAG CCGTGGCCAC TTCCCAGAAC
CTGATGGCCT GGCTGGGTCC CAGGGACAAC GATGTGGTGG CGCTGAACGG CGCGGTTGAA
GAGTCCCTGG GGCTGATGTC CACCGAACTC TCCTTTCGCG GGTTCTGCGT CGTCAACCAG
ACCGCCGAGG TGTCGGCCGA GTTGCCCAAA GGCATTCTGC GCAGCGTTTT CACCGCCAGC
CTGATCGCCC TGACCGACTC GGTCGAGGAA GCGGCCAGCG TGGTGGTCAG CGCTGCGGGC
GAGGCGGGCG ACACCCGATT GAAAATCGCG ATAGAGCCAG GCGGCATGGC TGAGCTTGCA
TCAATGGGAA GCCGGATGCC GACCTATCGC CTCCTGCAAT GGGCCGATGT TCAGGCGCTC
GCTGATGCGG AAGGCGTGCA TCTGGACTAT GCGCCCGACT TCGTGCAACT TGATTACTGC
GCCGCAGCCA CTGTGTTGAC CCGTTGA
 
Protein sequence
MSSDSHFLKE RLAEAARYAL MRRLLPAIRH NLAGSLQPIG MMSAMLERRI KSAAPDMAQL 
GKNTQALTTL SREAVATSQN LMAWLGPRDN DVVALNGAVE ESLGLMSTEL SFRGFCVVNQ
TAEVSAELPK GILRSVFTAS LIALTDSVEE AASVVVSAAG EAGDTRLKIA IEPGGMAELA
SMGSRMPTYR LLQWADVQAL ADAEGVHLDY APDFVQLDYC AAATVLTR