Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0652 |
Symbol | |
ID | 4687875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 691329 |
End bp | 692174 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639833646 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_980892 |
Protein GI | 121603563 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.334737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0629992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGACA GAATCAAAGC CTCCCTGTCC TCGCTGGCCC CGGCAGAGCA GCGGGTCGGC CGGCTGGTGC TGAGCGACCC GCGCGCCTTT GCCAGCCTGC CGATCACCGA GCTGGCGAGC CGCTCGCATG TCAGCAAGCC GACCGTGGTA CGGTTTTGCC GCAGCGTTGG CTACGACGGG CTGTCGGATT TCAAGCTCAA GCTGGCCGGC AGCGTGAGCG AAGGCGTGCC CTTCATTCAC CGCAGCGTCG ATGTGGACGA CAAGACCGGC GACGTGCTGG TCAAGGTGAT CGACAACACG GTGGCGGCAT TCCTGAAATA CCGCAACGAC GCCAGCCCGC TGGCGATTGA AAAAGCCGTC GTGGCGCTGC TGGCGGCTTA CCACACCGGC AAGCGCATCG AATTTTTTGG CGTCGGCAAC TCCGGCATCG TGGCGCAGGA TGCGCAGCAC AAGTTTTTCA GGCTGGGAAT CCAGAGCATT GCCTACAGCG ACGGCCACAT GCAGGTCATG AGCGCCTCGC TGCTCGGGCC GGGCGACTGC GTGGTGGTGA TTTCCAACTC AGGCCGCACC CGCGACCTGA TGGATGCCTG CGACATCGCC CGCAAAAATG GCGCCACCAC CATCGTGGTC ACCGCCACCG CCTCGCCGCT GGCGATGGCC GGCCACATTC ACCTGGCGGC CGACCATCCG GAAGGCTATG ACCGCTACAG CCCGATGGTG TCGCGCCTGC TGCACCTGAT GATCATCGAC ATTCTCGCCA CCTGCGTGGC GCTGCGCATC GGACCCAAGC TGCAGCCGCT GCTCAAGGAA ATGAAGAACA ACCTGCGCAA CAAGCGCTAC ACCTGA
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Protein sequence | MLDRIKASLS SLAPAEQRVG RLVLSDPRAF ASLPITELAS RSHVSKPTVV RFCRSVGYDG LSDFKLKLAG SVSEGVPFIH RSVDVDDKTG DVLVKVIDNT VAAFLKYRND ASPLAIEKAV VALLAAYHTG KRIEFFGVGN SGIVAQDAQH KFFRLGIQSI AYSDGHMQVM SASLLGPGDC VVVISNSGRT RDLMDACDIA RKNGATTIVV TATASPLAMA GHIHLAADHP EGYDRYSPMV SRLLHLMIID ILATCVALRI GPKLQPLLKE MKNNLRNKRY T
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