| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0638 |
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| Symbol | |
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| ID | 4687388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 676432 |
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| End bp | 678264 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639833632 |
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| Product | ABC transporter |
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| Protein accession | YP_980878 |
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| Protein GI | 121603549 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.226962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.140923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGC TTTCACGCAT TGCCCAGAAA CTCCGCGACT TCAAGCATTT CAGCCGCCGC
GTCTGGACCC TGTCGGCGCC CTACTTCCGC TCCGAAGACA AATGGAAGGC GCGCGGCCTG
CTGGCCGCCA TCGTGCTGCT GAACCTGGGC GCGGTGTACA TGCTGGTGCT GCTCAACGAG
TGGAACCGGG TGTTCTACGA CGCGCTGCAG AACAAGGACG CGGCGGTCTT CTGGACGCAG
CTGGCGCGCT TCACCTACCT GGCGTTTGCC TTCATCATCA TCGCTGTGTA CCGCTTTTAC
CTGACGCAGT TGCTGGAGGT GCGCTGGCGC GCCTGGATGA CCGCGCATTA CCTGGAGCGC
TGGCTCGCCG ACCATGCGTT CTACAAGCTG GAGCTGGCGC GCTTCACCGG CAACGGCGAT
GCCAACGGCA CGCCCGACAA CCCGGACCAG CGTATCCAGG AAGACATCAA CCTGTTCACC
ACCTACAGCA TCTCGCTGAG CATGGGCCTG CTGAACGCGG TGGTCACGCT GGTGAGTTTT
GTCGGCATCC TGTGGTCGCT GTCGGGCGCA TTTGCCTTCA ACTTCAATGG CGCCAGCTAC
TCCATTCCAG GTTTCATGGT CTGGATGGCG GTGCTGTACT GCGTGGCCGG CAGCGTGATC
ACGCACTACA TCGGCCGGCC GCAGATCCGG CTCAACTTCC AGCAGCAGCA GGTCGAGGCG
GACTTCCGGC ACCACATGGT GCGGGTGCGC GAATACAGCG AATCGATTGC GCTGGACAAG
GGCGAAGCGG TGGAGCGCGC GCAGTTAGAT ACGCGCTTTG CCGCCGTGCT GACCAACTAC
CTCAAACTGA TCAAGAAGCA GAAAAACCTG GTCTGGTTCA CCAACTTCTT TGGCCAGGCG
GCGGTGGTGT TTCCGTTCAT CGTGGCGGCG CCGCGCTTTT TCAGCGGCGC CATCCAGCTG
GGCGAATTGA TCCAGATTTC CTCGGCCTTC GGGCGCGTAC AGGATTCTCT GAGCTGGCTG
GTGGACAACT ACAGCAGCCT GGCCGCCTGG CGCGCCACGA CCGACCGCCT GACCAGTTTT
GAAGACAATA TCAGTGCTGT CGCGCAACAG GGACGGGCGC AGGCAGCTAG TAATTTAATA
GCAAATGACG CGCATCCCCT GGCCGCCGAC ACGCTGGCGG TCAGCGACCT GTCCTTGAAG
CTGCCGACCG GAGCAACCCT GCTCAGCGGC GTGTCGCTGC AGGCCGGGCC GGGCCAGAGC
GTGCTGCTCA AGGGGCCGTC GGGCAGCGGC AAATCGACGC TGTTCCGGGC GCTGGCCGGC
ATCTGGCCTT TTGCCACCGG CAGGGCGCAG CTGCCGCCGG ACGCGATGTT CATTCCGCAG
CGCCCCTACT TTCCCGATGG CAGCCTGCGC AATGCGCTGG CCTATCCGCA GCCCGCCGCG
CAGTACGACG ACGCGGCCCT GAAGCGGGCG CTGACGGATG CGCTGCTGCC GCAATTGGCG
AGCCGGCTTG ACGACGAGGA CGCCTGGAGC CAGAAGCTGT CGGGCGGCGA GCAGCAGCGG
CTGGCGATTG CCCGGGTGCT GCTGAAAAAA CCGCGCTGGA TTTTTGCCGA CGAGGCGACC
AGCGCGCTCG ACGAGGCGGC CGAAAGGAAC ATCTACGACA AGCTGCTGGC CAGCGTCAAA
ACGGCCAAAG GCAGCCTGGT GTCGATTGCC CACCGGCCGA CCGTGGCGGC TTTCCATGGC
ACGCTGTGGG AGCTTGAGAA ACTGCCCGAA GGCGCGCCAG CCTTGTACCG GGTGCGTGAA
ACCCCTCACG ACGGGCTGGC GCAAAAGGCT TGA
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| Protein sequence | MNLLSRIAQK LRDFKHFSRR VWTLSAPYFR SEDKWKARGL LAAIVLLNLG AVYMLVLLNE
WNRVFYDALQ NKDAAVFWTQ LARFTYLAFA FIIIAVYRFY LTQLLEVRWR AWMTAHYLER
WLADHAFYKL ELARFTGNGD ANGTPDNPDQ RIQEDINLFT TYSISLSMGL LNAVVTLVSF
VGILWSLSGA FAFNFNGASY SIPGFMVWMA VLYCVAGSVI THYIGRPQIR LNFQQQQVEA
DFRHHMVRVR EYSESIALDK GEAVERAQLD TRFAAVLTNY LKLIKKQKNL VWFTNFFGQA
AVVFPFIVAA PRFFSGAIQL GELIQISSAF GRVQDSLSWL VDNYSSLAAW RATTDRLTSF
EDNISAVAQQ GRAQAASNLI ANDAHPLAAD TLAVSDLSLK LPTGATLLSG VSLQAGPGQS
VLLKGPSGSG KSTLFRALAG IWPFATGRAQ LPPDAMFIPQ RPYFPDGSLR NALAYPQPAA
QYDDAALKRA LTDALLPQLA SRLDDEDAWS QKLSGGEQQR LAIARVLLKK PRWIFADEAT
SALDEAAERN IYDKLLASVK TAKGSLVSIA HRPTVAAFHG TLWELEKLPE GAPALYRVRE
TPHDGLAQKA
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