| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0550 |
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| Symbol | |
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| ID | 4687789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 579765 |
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| End bp | 580646 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639833545 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_980791 |
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| Protein GI | 121603462 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.255736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTTT TCTTTGAAGT GCTGATCGGC GGGCTGCTGG CGGGGGTGAT GTACTCGCTC
GTGGCTATCG GCTTTGTGCT GATTTACAAG GCTTCGGGCG TGTTCAATTT CGCGCAAGGC
TCGATGGTGC TGTTTGCGGC GCTGACCTTT GTCAGCCTGC ACGAGCGCGG CATGCCGTTC
TGGCTGGCGT TCGCGGTCAC GCTGGCGGCG ATGGTGGCGA TAGCCCTGCT GGTCGAGCGC
CTGGTGCTGC GCCCGCTGGT CAACCGCTCG CCCATCACCC TGTTCATGGC GACGCTGGGC
CTGTCCTACA TGATCGAGGG CGCGGCCCAG GCCTTGTGGG GCGCGCAGGT CCACGGGCTG
GAGCTGGGCA TCAGCGACGA GCCGCTGGCG CTGGGCGGCG TGCTGCTGTC GCAGTTTGAC
TTGTTCGCGG CGGGCACGGC GGCGGTGCTG GTCACGGCGC TGTCGCTGCT GTTCAGCAAG
ACGCGCATCG GCCTGTCGCT GCGCGCCGTG GCCGACGACC CGCTGGCCGC GCTGGCTGTC
GGCATTCGCC TGCAGCGCAT CTGGGCGGTC GTGTGGGCGG TGGCCGGTTT TGTCGGACTG
GTGGCCGGGC TGCTCTGGGG CGCGCGGCTG GGCGTGCAGT TTTCGCTCTC GCTGGTGGTG
CTCAAGGCGC TGCCGGTGCT GATCATTGGC GGCTTCTCGT CGATAGGCGG CGCCATCGTC
GGCGGCCTGA TCATCGGCGC GTCGGAAAAG CTGGCCGAAA TCTACCTCGG CCCGGTCATT
GGTGGCGGCC TGGAGAACTG GTTTCCCTAT GTGCTGGCGC TGCTGTTTTT GCTGGTGCGC
CCGGCAGGCC TCTTTGGCGA ACGCGCCATC GAGCGGGTCT GA
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| Protein sequence | MEFFFEVLIG GLLAGVMYSL VAIGFVLIYK ASGVFNFAQG SMVLFAALTF VSLHERGMPF
WLAFAVTLAA MVAIALLVER LVLRPLVNRS PITLFMATLG LSYMIEGAAQ ALWGAQVHGL
ELGISDEPLA LGGVLLSQFD LFAAGTAAVL VTALSLLFSK TRIGLSLRAV ADDPLAALAV
GIRLQRIWAV VWAVAGFVGL VAGLLWGARL GVQFSLSLVV LKALPVLIIG GFSSIGGAIV
GGLIIGASEK LAEIYLGPVI GGGLENWFPY VLALLFLLVR PAGLFGERAI ERV
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