| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0544 |
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| Symbol | |
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| ID | 4688781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 573413 |
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| End bp | 574417 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639833539 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_980785 |
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| Protein GI | 121603456 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.97989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.846557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATCT TCCCCATGAC ACTGAATCGA CGTACCCTTC TTTCGCTCAC CGGCGGCCTG
GCTGGCGCAG TGATCGCCCC CGCAACGCTG CGCGCGGCCG ATCTGCCGCA GGAAGTGCGT
ATCGATTACG CCACCTATTC GCCCACCAGC CTGGTGCTCA AACGCTTCGG CTGGCTTGAA
GAAGACCTCA AGCGTGACGG CGTGGCGGTG AAATGGGTGT TCAGCGCGGG CAGCAACCGG
GCGCTGGAAT ACCTGAACGC CAAAAGCCTG GACATCGGCT CTGCGGCTGG GCTGGCCGCC
TTGCTGGCGC GGGCCAATGG CAACCCGATC CGCGCCCCCT ACATTTTTTC GCGGCCCGAA
TGGACCGCGC TGCTGGTGCC AAAGGACTCG CCGATCCGCA CGCTGGCGGA CCTCAAGGGC
AAAAAAGTGG CTGCGACCAA GGGCACCGAT CCTTATTTGT TCCTGCTGCG CGCGCTGCAG
ACGGTCAAGC TCAAGCGCAG CGACATCGAA CATGTCTCCC TGCAGCACGC CGACGGCCGT
GCGGCGCTGG AGCAGGGGCG CGTGGACGCC TGGGCCGGCC TGGACCCGCA CATGGCGGCC
AGCGAACTCA CGGCCGGCTC CCGCCTGCTC TACCGCAACG TCGCCTTCAA CACCTATGGT
TTTCTGAATG TGCGCGAAGA CTTCCAGCAG CGCCACCCGG AACTGCTCAG GCGCGTCATC
GGCGCCTATG AACGCGCCCG CCTGTGGACG CTGGCCAATA CCGGCGAAGC GGCCCGCATC
CTGGCCGACG AGGCCAAGGT CAGCCTGCAG GTGGCGCTGC TGCAACTCAA GCTGCGCACC
GACCTGAGCA ATCCGCAGCC TTCCGCCGAA CATGTGAAGG CGCTGCAGGC AGCCACGCCG
ATTCTGCTGG ACGAGCAACT GGTCAAACCC GGCACCGACC TGCTCAGAAC CGTCGAAGCG
CTGGTGGACA CGCGTTTTGC GCAGGGACTG ATTCGCCAGG CCTGA
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| Protein sequence | MEIFPMTLNR RTLLSLTGGL AGAVIAPATL RAADLPQEVR IDYATYSPTS LVLKRFGWLE
EDLKRDGVAV KWVFSAGSNR ALEYLNAKSL DIGSAAGLAA LLARANGNPI RAPYIFSRPE
WTALLVPKDS PIRTLADLKG KKVAATKGTD PYLFLLRALQ TVKLKRSDIE HVSLQHADGR
AALEQGRVDA WAGLDPHMAA SELTAGSRLL YRNVAFNTYG FLNVREDFQQ RHPELLRRVI
GAYERARLWT LANTGEAARI LADEAKVSLQ VALLQLKLRT DLSNPQPSAE HVKALQAATP
ILLDEQLVKP GTDLLRTVEA LVDTRFAQGL IRQA
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