| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0526 |
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| Symbol | |
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| ID | 4687743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 554494 |
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| End bp | 555273 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639833522 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_980768 |
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| Protein GI | 121603439 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.301013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATGC AATCCGAAAC CCTTCCCCGC CTGACGCCGG ACACGGCGCT GTTCCTTGAC
TTCGACGGCA CGCTGGTCGC GCTGGCCGCG CAACCCGAAC TGGTGGAAGT CCCCCTGGGC
CTGACCAGCA CGCTGGCTGC GCTGCACCGG CAATTGCGCG GCGCGCTGGC GCTGGTGTCG
GGCCGCCGGC TGCTGGACCT GGACGGTTTC CTGGCGCCCT TGCTGCTGCC GTCGGCCGGC
GAACATGGCG CGCAGCGCCG CACCGCCGAC GGCCTGCTGA TCAGCGCGCC GCCAGCGGAC
ATGCGGCAGA TCCTGCAGGC GGCCGAAGGC CTGGTTGCCC GCCATCCCGA CCTGAAGCTG
GAACGAAAAA ACCTGGCGCT GAGCCTGCAT TACCGGCACG CGCCCGAACT CGAAAGCCTG
TGCCTGCAGG TGATGCGCGA AGCGGCGCAA GGCAATGACA GCGTCGAGCT GATGCAGGGC
AAATGCGTGA TTGACCTGAA ACCGGCGGGC TTCAGCAAAG GCACGGCGAT TGCGTCCTTC
ATGACCGAAG CGCCGTTTGC CGGCCGCATT CCGCTGTTTG CCGGCGACGA CGTGACCGAT
GAAGCCGGCT TTGAGGAGGT GCGGCGCATG GGCGGCCACA CCATCAAGGT CGGCCCGGGG
CCAACGGCGG CCCAGTACCG CTGCGCCAGC GTGGACCAGC TGGCCGCCTG GCTGCAATCG
GCCAGCGGGG TGTCCCCCGA CGCCGGCGGC CTGTCCAGCC GCCCGGGGCA TTCAGCATGA
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| Protein sequence | MPMQSETLPR LTPDTALFLD FDGTLVALAA QPELVEVPLG LTSTLAALHR QLRGALALVS
GRRLLDLDGF LAPLLLPSAG EHGAQRRTAD GLLISAPPAD MRQILQAAEG LVARHPDLKL
ERKNLALSLH YRHAPELESL CLQVMREAAQ GNDSVELMQG KCVIDLKPAG FSKGTAIASF
MTEAPFAGRI PLFAGDDVTD EAGFEEVRRM GGHTIKVGPG PTAAQYRCAS VDQLAAWLQS
ASGVSPDAGG LSSRPGHSA
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