| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0525 |
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| Symbol | |
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| ID | 4689685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 552677 |
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| End bp | 554497 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639833521 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_980767 |
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| Protein GI | 121603438 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.262384 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG CCGTCCTGGC GCCCAACTTT GCGCCGCCCG CACCGCCGTC GCTGTCGCTG
GGCGTGATCG GCAACTGCGC GTTCAGCGCG CTGGTCGATG CGCGCGGACG CATCGTCTGG
TGCTGCCTGC CGCGCTTCGA TGGCGACCCG GTGTTCAATG CGCTGCTCGA CGAGAGCGAC
AAGGGCAGCG CCTTTGCCAT CGAAATCGAG AACTTTTCCC ATTCAAAGCA ATGGTACGAC
CCGAACACCG CCGTGCTGCG CACCCAACTG TTCGACAAAA GCGGCCAGGC GATTGAAATC
ACCGACTTTG CGCCGCGCTT TTACAACCGC TCGCGGTTTT TCAAGCCGAT GACGCTGGTG
CGCCGGGTGC GCCCGATCAA GGGCGCGCCG CGCATCCGGG TGCAGCTCGA CGTGCGCTTC
GACTGGGGCC GCAGCGAGCC AGTGATCACC CAGGGCAGCA ACCACCTGCG CTATGTCGGC
GATGCGCTGA CGCTGCGCCT GAACACCGAC GCGCCGCTGT CGCACCTGCT GGCCAAGCGG
CCTTTCGTGC TGACGCGCGA ATACAATTTT TTGCTCGGCT CCGACGAGTC GCTGGCCGAC
GGCATTGCCG ACACCGCGCG CCTGTTCGAG CAGGAAACGC TGTCGTACTG GCGCAAGTGG
AGCCAGCGCC TGCACATCCC GCTCGAATGG CAGGAAGCCG TGATCCGGGC CGCGATCACA
CTCAAGCTCT CGCTGTTCGA GGACACCGGC GCGATTGTCG CGGCCATGAC CACCAGCATT
CCCGAAGCGC CCAACAGCGG ACGCACCTGG GACTACCGCT TTTGCTGGCT GCGCGATGCC
TTTTTTGTCG TTCGGGCGCT CAACAGCCTG TCCGAAGTCG GCACCATGGA AGACTACCTG
CGCTGGCTCG GCAATGTCGT GGTGCAGGCC GACGGCGGGC ATATCCAGCC GCTGTTCGGC
ATTGGCCTGG AGCTGGAGCT GCCCGAAGCG GTGTACGACC ACCTGGGCGG CTACCGGGGC
ATGGGGCCGG TGCGCGTGGG CAACCAGGCG CAGGAGCATT TCCAGCACGA TGTCTATGGC
AATGTGATCC TGGGTGCGGC CCAGGCCTTT CACGACCACC GGCTGCTGCA CCGGGCAGGC
GCGGCCGAAT TCTTGCGCCT CGAAGCGGTG GGCGAGCAGG CGGTGCGCAG CTACGACAAA
CCCGATGCCG GCATGTGGGA GTTGCGCACG CGCGCCCGGG TGCATACCTC GTCGGCGCTG
ATGTGCTGGG CGGCCTGCGA CCGGCTGGGC AAGATTGCCG TCACGCTCAA GCAGCCCGAG
CGCGCCAGCT ACTGGAGCCA TCATGCGCAG ATCATGCGCG AGCGCATCCT GCGCGAATCG
TGGAGCGAGG AGCGCCAGGC CTTTGCCGAG AGCTTTGGCG GGCGCGACCT GGACGCCAGC
GTGCTCCTGA TGATCGAAGT CGGCTTCATC GAGCCGAAAG ACCCGCGCTT CGTGGCCACC
GTCGATGCGC TGGAAAAATA TTTGTGCGAC GGCCCCTACA TGCGCCGCTA CGAGGCGCCC
GACGACTTTG GCAAGCCCGA AACCGCCTTC AACATCTGCA CCTTCTGGCG CATCGACGCG
CTGGCGCGCA TCGGCCGCAA GGATGAGGCC CGGGCGATTT TCGAGACCAT GCTGGCCGCC
CGCAACCACG TCGGCCTGCT GTCCGAGGAC ACCCATCCGG TGACCGGCGA GATGTGGGGC
AATTTCCCGC AAACCTATTC GATGGTCGGC ATCATCAACG CCGCCGTGCG CCTGTCGGCC
CCTTGGGATT CCCTAGTATG A
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| Protein sequence | MSAAVLAPNF APPAPPSLSL GVIGNCAFSA LVDARGRIVW CCLPRFDGDP VFNALLDESD
KGSAFAIEIE NFSHSKQWYD PNTAVLRTQL FDKSGQAIEI TDFAPRFYNR SRFFKPMTLV
RRVRPIKGAP RIRVQLDVRF DWGRSEPVIT QGSNHLRYVG DALTLRLNTD APLSHLLAKR
PFVLTREYNF LLGSDESLAD GIADTARLFE QETLSYWRKW SQRLHIPLEW QEAVIRAAIT
LKLSLFEDTG AIVAAMTTSI PEAPNSGRTW DYRFCWLRDA FFVVRALNSL SEVGTMEDYL
RWLGNVVVQA DGGHIQPLFG IGLELELPEA VYDHLGGYRG MGPVRVGNQA QEHFQHDVYG
NVILGAAQAF HDHRLLHRAG AAEFLRLEAV GEQAVRSYDK PDAGMWELRT RARVHTSSAL
MCWAACDRLG KIAVTLKQPE RASYWSHHAQ IMRERILRES WSEERQAFAE SFGGRDLDAS
VLLMIEVGFI EPKDPRFVAT VDALEKYLCD GPYMRRYEAP DDFGKPETAF NICTFWRIDA
LARIGRKDEA RAIFETMLAA RNHVGLLSED THPVTGEMWG NFPQTYSMVG IINAAVRLSA
PWDSLV
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