Gene Pnap_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0519 
Symbol 
ID4688654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp546835 
End bp547941 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content66% 
IMG OID639833515 
Producthypothetical protein 
Protein accessionYP_980761 
Protein GI121603432 
COG category[S] Function unknown 
COG ID[COG1565] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.386799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATC CTTTCATTTT AACGAGCCCC CTGCAGGCCG ATATCGCCAA GGCCATCGAA 
TCGGCCGGCG GCTGGCTGGG TTTTGATGTT TTCATGGCGC TGGCGCTCTA CCAGCCCGGC
CTGGGCTACT ACGCCAGGGA CTCGCTGAAA TTCGGCCTGA TGCCCGGCGG CGTGAAGGGC
GGCAGCGATT TCGTCACCGC GCCCGAGTTG TCGCCGCGTT TTGGCCAGAC GCTGGCGCGG
CAGGTGGCGC AGGCGCTGCA GGCCTCGGGC ACGACCGAAG TCTGGGAGTT TGGCGCCGGC
TCCGGTGCGC TGGCGCAGCA GGTGCTCGAT ACGCTGGGGG AGCAGGTCAC GCGCTACACG
ATTGTCGATC TCTCTAGCTC CCTGCGTGAA CGCCAGCGCG AACGGCTGGC CGCCCATGCC
GGAAAAGTGC AGTGGGCGAC CGAATTGCCG GCGCGCATGC GCGGCGTGGT GCTGGGCAAC
GAGGTGTTGG ACGCCATGCC AGTCAAGCTG CTGGCGCGGC TGGGTGGCGT CTGGCACGAG
CGCGGCGTGG TGCTGCATGA AGGGCGCTTT ACCTACGCCG ACTGTCCCAC CGATTTGCGC
CCGCCGCTGG AGGTGGCGGG CCGGCACGAT TACGTCACCG AAATTCACCC CCAGGCCGAA
GGCTTTGTGC GCACGCTGGC CGACCGGCTG GAAGCCGGCG CGGCGTTGTT GCTCGATTAC
GGCTTTCCCG AGCACGAGTA CTACCACCCG CAGCGCGACA TGGGCACGGT GATGTGCCAC
CGCGCGCACC TGCTTGATGC CGACGCGCTG GCCGACGTGG GCGAAAAAGA CATCACGGCG
CACGTCAATT TCACCGGCAT CGCGCTGGCC GGGCAGGAGG CAGGGCTGCA AGTGCTGGGC
TACACCAGCC AGGGACGCTT TTTGCTGAAC TGCGGACTGC TGGGCGGCCT GGAAGACGCC
AGCCTGGCCG AGCGAGCCAT GGTGCAAAAG CTGGTCAACG AGCATGAAAT GGGCGAGCTG
TTCAAGGTGA TTGCGTTTGG CGCGAAGAAC AGTCCTGCGT GGGAGCCGAT GGGCTTTTCG
GCGGGGGACC GCACGCATAC GCTGTAG
 
Protein sequence
MTNPFILTSP LQADIAKAIE SAGGWLGFDV FMALALYQPG LGYYARDSLK FGLMPGGVKG 
GSDFVTAPEL SPRFGQTLAR QVAQALQASG TTEVWEFGAG SGALAQQVLD TLGEQVTRYT
IVDLSSSLRE RQRERLAAHA GKVQWATELP ARMRGVVLGN EVLDAMPVKL LARLGGVWHE
RGVVLHEGRF TYADCPTDLR PPLEVAGRHD YVTEIHPQAE GFVRTLADRL EAGAALLLDY
GFPEHEYYHP QRDMGTVMCH RAHLLDADAL ADVGEKDITA HVNFTGIALA GQEAGLQVLG
YTSQGRFLLN CGLLGGLEDA SLAERAMVQK LVNEHEMGEL FKVIAFGAKN SPAWEPMGFS
AGDRTHTL