Gene Pnap_0511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0511 
Symbol 
ID4687662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp539830 
End bp540756 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content46% 
IMG OID639833507 
Producthypothetical protein 
Protein accessionYP_980753 
Protein GI121603424 
COG category[S] Function unknown 
COG ID[COG2958] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.457472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGCCA AGTTCACTTT TCTCGACCTC GCTGAAGAAG TTCTCAAGAA TTCCAGTACG 
CCGCTTGACA TCTCAACCAT TTGGAAAAAT GGGTTGGCCT CCAAAGCCGT TGATAAAGTA
GGTTCTAAAG GTAAAACGCC TTGGATATCC TTGGGAGCGC GCTTGTACGT CGATACCAAA
GACAATGCGA AATCTTGTTT CCTTCGAACT GGAGATAACC CTGTATTGTT TGGACTGAAA
TCGATTCACA CGGCCCAGCA AGCCCAAGAG GCCATCATCA AGGTAGAGTC GATTCCCAAA
CTGAAGGAGC GAAACCTACA CCCCTTACTG GCATTTTTCG CCAAGCTTTA TTTGGGTGAT
GCTTACGTGA AAACTATCTA TCATGAAAAG TCACTCAAGA AGTCTTTCAA TGAATGGCTG
CATCCCGATT TGGTCGGTGT GCGTTTTCCT GACCTGCATG TAGATGCTCG TTCACTTGCA
GCGACAGCTG GTGAATTACC TTTCAAGTTG CTATCGTTTG AGTTGAAGCG GAGTCTGAAT
TTTTCAAACT TGCGGGAGTC CTTTTTTCAG GCAGTTAGCA ACTCATCCTG GGCGCACCAA
GGCTATTTGG TGGCTGCAAA TATCAAGGAA AGTCCCGATT TTCTCGGTGA ATTGAAACGC
CTGTCCGGTA GCTTTGGCAT CGGTGTAATC TCGCTCGATA TCGAGAATCC AGATGACTCT
TCGGTGCTTT ATCCGGCGGG GGAGAGAAAG AATCTGGATT GGGACAGCAT CAATAAACTT
GCTTCCGAGA ACCCTGATTT CAGTCAATTT CTGCGCGACG TGCGAATCGA TTTGGACGGG
AAAAAAGTTC ATCCCGCCGA GTACGACAAG ATTGAAAAAG ACATAGACAA GCTGAAGTTA
TTAGTCAACC CTACAGCTAA ACCATGA
 
Protein sequence
MLAKFTFLDL AEEVLKNSST PLDISTIWKN GLASKAVDKV GSKGKTPWIS LGARLYVDTK 
DNAKSCFLRT GDNPVLFGLK SIHTAQQAQE AIIKVESIPK LKERNLHPLL AFFAKLYLGD
AYVKTIYHEK SLKKSFNEWL HPDLVGVRFP DLHVDARSLA ATAGELPFKL LSFELKRSLN
FSNLRESFFQ AVSNSSWAHQ GYLVAANIKE SPDFLGELKR LSGSFGIGVI SLDIENPDDS
SVLYPAGERK NLDWDSINKL ASENPDFSQF LRDVRIDLDG KKVHPAEYDK IEKDIDKLKL
LVNPTAKP