Gene Pnap_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0504 
SymbolanmK 
ID4686115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp533105 
End bp534244 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content66% 
IMG OID639833500 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_980746 
Protein GI121603417 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACT ACACCATTGG CCTGATGTCA GGCACTTCCC TTGACGGCGC CGACGGCGTT 
CTGGTCGATT TCTCAAGCCA GACGCTGCGC GTCGTCGCCA GCGCCAGCGA GCCGTTTGGC
GACAGTTTTA GGGCTGAACT GCTGGCGCTC AATTCGCCTT CGCACAATGA ATTGCACCGC
GCCGCGCTGG CGGGCAGCCA GCTGGCGGCG GTCTATGCCC AGGTGGTTGC CAAGCTGGTG
CGGCAAGCTG GCGCGCAGGG CATCAGCGCC AGCCAGATCC AGGCCATTGG CGCGCACGGG
CAGACGGTCA GGCACCAGCC CCAGCGAACT TCAGCAGAAC CTGCGGGCGC GGGCTACACG
CTCCAGCTCA ACAATCCGGC CCTGCTGGCC GAATTGACCG GCATTGACGT GGTGGCCGAT
TTCCGCAGCC GCGATGTCGC CGCAGGCGGC CAGGGTGCGC CGCTGGTGCC GGCGTTTCAC
CAGGGTGTCT TTGGCCGCGC GGACGCCACG GTCGCGGTGC TGAACCTGGG CGGCATCTCC
AATCTCAGCG TGCTGCCGCC TGCCGGCTCG CCCTTGCCGG TGCTGGGCTT TGACTGCGGG
CCGGGCAACG CGCTGATGGA CGCATGGTGC CTGCGGCACA CCGGCCAGCC TTTTGATGCG
GGCGGCACCT GGGCGAAAAG CGGCCGACTG GTTCCGGCGC TGCTGGCCAG CCTGCGGGGC
GAACCCTACT TCTCGCAGCC GATTCCCAAG AGCACGGGAC GCGACCTTTT CAGCCTGGCG
TGGCTGGATG AAAAACTGCG CCCCTTTTCC GGCGAACGCC CCGAGGATAT TCAAAATACA
TTGACCGAAT TGACGGTTTT CGCATGTACA GCGGGCGTTA GCAGCTATGG AAAAGAGAGC
ACTGAACTGA TCGTCTGCGG CGGCGGCGCT TTCAATCTGT ATCTGCTGCA GCGCCTGCAG
GCGGGCCTGC CCTGGCTGCG CGTCAGCACT TCGGACCAGC ACGGCCTGCC GCCGCTGCAG
GTCGAGGCGG CTGCCTTTGC CTGGCTGGCG CGCCAGATGA TCCAACGCCA GCCCGGTAAC
CTGCCCGGCG TGACCGGCGC GGCGGGCTTG CGTGTGCTGG GTGCGCTGTA TCCCGCCTGA
 
Protein sequence
MHDYTIGLMS GTSLDGADGV LVDFSSQTLR VVASASEPFG DSFRAELLAL NSPSHNELHR 
AALAGSQLAA VYAQVVAKLV RQAGAQGISA SQIQAIGAHG QTVRHQPQRT SAEPAGAGYT
LQLNNPALLA ELTGIDVVAD FRSRDVAAGG QGAPLVPAFH QGVFGRADAT VAVLNLGGIS
NLSVLPPAGS PLPVLGFDCG PGNALMDAWC LRHTGQPFDA GGTWAKSGRL VPALLASLRG
EPYFSQPIPK STGRDLFSLA WLDEKLRPFS GERPEDIQNT LTELTVFACT AGVSSYGKES
TELIVCGGGA FNLYLLQRLQ AGLPWLRVST SDQHGLPPLQ VEAAAFAWLA RQMIQRQPGN
LPGVTGAAGL RVLGALYPA