Gene Pnap_0459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0459 
Symbol 
ID4688899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp480874 
End bp482004 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content65% 
IMG OID639833456 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_980702 
Protein GI121603373 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATACTCA ATGACGACCA GGAACAGGTG CGCGATGCGG TTCGCGCCTT TGCGCAGGCC 
GAACTCTGGC CGCATGCCGC GCGCTGGGAC AAGGAGCATT ACTTTCCGAA AGAAGCGCAC
AAGGGGCTGG CCGCGCTCGG CGCCTACGGC ATCTGCGTGC CCGAGGAATT CGGCGGCGCC
AACCTCGACT ACGTGACGCT GGCGCTGGTG CTCGAAGAAA TCGCCGCTGG CGACGGCGGC
ACCAGCACCG CCATCAGCGT GACCAACTGT CCGGTCAATG CCATCCTGAT GCGCTACGGC
AACCCAGCGC AGAAAAAGCA GTGGCTCATG CCGCTGGCGC AGGGCGATCT GTTGGGCGCG
TTCTGCCTGA CCGAGCCGCA CACCGGCAGC GATGCTTCGT CACTGCGAAC CACGGCCGTG
AAAGACGGCG ACGGCTATGT GCTGAGCGGC GTCAAGCAGT TCATCACCAG CGGCCAGAAC
GGTCAGGTCG CCATCGTCAT CGCTGTCACC GACAAGGGCG CCGGCAAGAA GGGCATGAGC
GCCTTCATCG TGCCGACCGA TGCGCCCGGC TATTCAGCCT CCAGGCTCGA AGACAAGCTG
GGCCAGCATT CGAGTGACAC CGCGCAGGTC AACTTCGACA ACTGCCGCAT CCCGGCCGAG
AACCTGATCG GCGCCGAAGG CGAAGGCTAC AAGATCGCCC TGGGCGGGTT AGAGGGCGGG
CGCATCGGCA TTGCCGCGCA AAGCGTCGGC ATGGCGCGCA GCGCGTTCGA GGTGGCCGTG
GCCTATGCCA AGGAGCGCCA GAGTTTTGGC AGCGCGATCT TCAACCACCA GGCGGTCGGT
TTCCGGCTGG CCGACTGCGC GACCCAGCTT GAAGCGGCCC GCCAGCTGAT CTGGCACGCA
GCCAGCCTGC GCGACGCGGG ACGGCCCTGC CTGAAGGAAG CGGCGATGGC CAAGCTGTTC
GCCAGCGAGA TGGCTGAGAA AGTCTGCAGC GCCGCCATCC AGACGCTGGG CGGCTACGGT
TATGTGAGCG ACTTCCCGGT CGAGCGCATC TACCGCGACG TGCGCGTGTG CCAGATCTAC
GAAGGCACGA GCGATGTGCA GAAGATCATC ATCCAGCGCG CGCTGGCTTG A
 
Protein sequence
MILNDDQEQV RDAVRAFAQA ELWPHAARWD KEHYFPKEAH KGLAALGAYG ICVPEEFGGA 
NLDYVTLALV LEEIAAGDGG TSTAISVTNC PVNAILMRYG NPAQKKQWLM PLAQGDLLGA
FCLTEPHTGS DASSLRTTAV KDGDGYVLSG VKQFITSGQN GQVAIVIAVT DKGAGKKGMS
AFIVPTDAPG YSASRLEDKL GQHSSDTAQV NFDNCRIPAE NLIGAEGEGY KIALGGLEGG
RIGIAAQSVG MARSAFEVAV AYAKERQSFG SAIFNHQAVG FRLADCATQL EAARQLIWHA
ASLRDAGRPC LKEAAMAKLF ASEMAEKVCS AAIQTLGGYG YVSDFPVERI YRDVRVCQIY
EGTSDVQKII IQRALA