Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0459 |
Symbol | |
ID | 4688899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 480874 |
End bp | 482004 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639833456 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_980702 |
Protein GI | 121603373 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGATACTCA ATGACGACCA GGAACAGGTG CGCGATGCGG TTCGCGCCTT TGCGCAGGCC GAACTCTGGC CGCATGCCGC GCGCTGGGAC AAGGAGCATT ACTTTCCGAA AGAAGCGCAC AAGGGGCTGG CCGCGCTCGG CGCCTACGGC ATCTGCGTGC CCGAGGAATT CGGCGGCGCC AACCTCGACT ACGTGACGCT GGCGCTGGTG CTCGAAGAAA TCGCCGCTGG CGACGGCGGC ACCAGCACCG CCATCAGCGT GACCAACTGT CCGGTCAATG CCATCCTGAT GCGCTACGGC AACCCAGCGC AGAAAAAGCA GTGGCTCATG CCGCTGGCGC AGGGCGATCT GTTGGGCGCG TTCTGCCTGA CCGAGCCGCA CACCGGCAGC GATGCTTCGT CACTGCGAAC CACGGCCGTG AAAGACGGCG ACGGCTATGT GCTGAGCGGC GTCAAGCAGT TCATCACCAG CGGCCAGAAC GGTCAGGTCG CCATCGTCAT CGCTGTCACC GACAAGGGCG CCGGCAAGAA GGGCATGAGC GCCTTCATCG TGCCGACCGA TGCGCCCGGC TATTCAGCCT CCAGGCTCGA AGACAAGCTG GGCCAGCATT CGAGTGACAC CGCGCAGGTC AACTTCGACA ACTGCCGCAT CCCGGCCGAG AACCTGATCG GCGCCGAAGG CGAAGGCTAC AAGATCGCCC TGGGCGGGTT AGAGGGCGGG CGCATCGGCA TTGCCGCGCA AAGCGTCGGC ATGGCGCGCA GCGCGTTCGA GGTGGCCGTG GCCTATGCCA AGGAGCGCCA GAGTTTTGGC AGCGCGATCT TCAACCACCA GGCGGTCGGT TTCCGGCTGG CCGACTGCGC GACCCAGCTT GAAGCGGCCC GCCAGCTGAT CTGGCACGCA GCCAGCCTGC GCGACGCGGG ACGGCCCTGC CTGAAGGAAG CGGCGATGGC CAAGCTGTTC GCCAGCGAGA TGGCTGAGAA AGTCTGCAGC GCCGCCATCC AGACGCTGGG CGGCTACGGT TATGTGAGCG ACTTCCCGGT CGAGCGCATC TACCGCGACG TGCGCGTGTG CCAGATCTAC GAAGGCACGA GCGATGTGCA GAAGATCATC ATCCAGCGCG CGCTGGCTTG A
|
Protein sequence | MILNDDQEQV RDAVRAFAQA ELWPHAARWD KEHYFPKEAH KGLAALGAYG ICVPEEFGGA NLDYVTLALV LEEIAAGDGG TSTAISVTNC PVNAILMRYG NPAQKKQWLM PLAQGDLLGA FCLTEPHTGS DASSLRTTAV KDGDGYVLSG VKQFITSGQN GQVAIVIAVT DKGAGKKGMS AFIVPTDAPG YSASRLEDKL GQHSSDTAQV NFDNCRIPAE NLIGAEGEGY KIALGGLEGG RIGIAAQSVG MARSAFEVAV AYAKERQSFG SAIFNHQAVG FRLADCATQL EAARQLIWHA ASLRDAGRPC LKEAAMAKLF ASEMAEKVCS AAIQTLGGYG YVSDFPVERI YRDVRVCQIY EGTSDVQKII IQRALA
|
| |