| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0444 |
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| Symbol | |
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| ID | 4688195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 462753 |
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| End bp | 464888 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639833441 |
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| Product | glycine--tRNA ligase |
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| Protein accession | YP_980687 |
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| Protein GI | 121603358 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0906989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCA AAAACCTTCT GGTCGAACTG TTCGTGGAAG AGCTGCCGCC CAAGGCGCTG
AAAAAGCTCG GCGATGCCTT CGCCGGCGTG CTGGCCGAGC AGCTCAAGGC GCTGGGCCTG
GCCACGGCTG AATCGGTGGT GACGGCCTAT GCCTCGCCTC GCCGCCTGGC CGCGCACATC
AGCCATGTCT GGCTCAAGGC CGACGACAAG GCCGTGCAGC AAAAGCTCAT GCCGGTGTCG
GTCGGGCTCG ATAGCGCCGG CCACGCCACG CCGGCGCTGC TGAAAAGGCT GCAGGCGCTG
GGCGCCGACC TGTCCGATCC GGTGGCCGCT GTCGCCGCGT TGAAGCGCGC GCCCGATGGC
AAGGCCGAAG CGCTGTTCTA CAACAGCCTG GTGACCGGCG CCACGCTGGA TACCGGCCTG
CAGAAAGCGC TGGAGGAAGC GATTGCCAAG CTGCCGATTC CGAAGGTCAT GAGCTACCAG
CTGGAAACCG ACTGCGAGCT GCCCGGCTGG ACCAGCGTGA ATTTCGTGCG CCCGGCGCAC
GGCCTGGTCG CGCTGCACGG CAGCACCGTG GTGCCCGTCA AGGTGCTGGG CCTGAAGGCC
GGCAACAGCA CGCGCGGCCA CCGCTTTGAA GCCGCCGTTG ACCCGGTGGT GCTGGCGGAC
GCCGACAGCT ACGCCGTTAC CCTGGAAATC GACGGCGCGG TGATCGCCAG CTTTGCCCAG
CGCAAGGCCG AGATCGCGCG CCAGCTGGCC GAGGCGGCCG CCGAACTGGG CGGCGGCGTC
CAGCCGATTG AAGACGACGC CCTGCTCGAC GAAGTGACCG CGCTGGTCGA GCGGCCCAAT
GTGCTGGTCT GCGAGTTTGA AAAAGAGTTC CTCGATGTGC CGCAGGAATG CCTGATCCTG
ACGATGAAGG CCAACCAGAA ATACTTTCCG CTGCTCGACG CCGCAGGCAA GCTGACGAAC
AAGTTCCTCG TCGTCAGCAA CATCAGCCCC GAAGACGCCA GCTTTGTCAT CGGCGGCAAC
GAACGCGTGG TGCGCCCGCG CCTGGCCGAT GCGAAGTTTT TCTTTGACCA GGATCGGAAG
AGGACGCTGG CTTCGCGCGT TGAAGGCCTG GGCAAAGTTG TTTATCACAA CAAGCTGGGC
ACGCAGGGTG AAAGGACGGA GCGTGTCGCT GAAATCGCAG TAAAGATCGC TCAGTTACTT
GAGGGTGACG CGCTAGCCGG GAAAGCTGGG AAGGCCGCTT GGTTGGCAAA GGCGGATTTA
CTTACTGACA TGGTGGGCGA GTTCCCCGAA CTACAAGGAA CAATGGGGCG CTATTACGCG
TTACACGACG GCCATAGTGC GGAAATAGCC GCTGCAATTG AAGATCACTA CAAGCCGCGC
TTTGCCGGCG ACGAGTTGCC GCGCAACCCG GTCGGCGTGG TCGTTGCGCT GGCTGACAAG
CTCGAAACGC TGGTCGGCAT GTTCGGCATT GGCAACCTGC CCACGGGTGA CAAAGACCCG
TTCGCGCTGC GCCGCCATGC GCTGGGCGTG ATTCGGATGC TGGTTGAAAA AGACTTGCCG
CTCGATTTGG GTGCTCTGGT GGGCGGCGCG GCTCCGGTGT TCGGCGACAA GATCACCGAT
GCAACGCCAG CGTTGCTCGA CTTCATCTAC GACCGCCTAT CTGGCTCCCT GCGCGAACAA
GGCTACAGCG CCCAGGAAGT CGATTCAGTC GTCTCCCAAA AACCGCAGCG CCTCGGCGAC
GTGCCCAAGC GCCTGGCCGC CGTTCGCGCC TTCGCCGCGC TGCCCGAAGC CCCGGCCCTG
GCCGCCGCCA ACAAGCGCAT CGGCAACATC CTCAAGAAGG AAGCGCTGGA AGTGGACCCG
CATGTCAGCG AACTGCTGCT CAGGGAAGCG GCCGAAATCG CCCTGTATGC CGCGATGCGG
GACGTGGTGC CCACGGCCAA TGCGCAGTTC GACACTGGTG ACTACACCGC CTCGCTGCAA
ACGCTGGCCG CCTTGCGCGC GCCTGTCGAT GCCTTCTTCG ACGGCGTGAT GGTCAACGCC
GAGGAACTCG ACCTGCGCCT GAACCGCCAG GGCCTGCTCA AAAGCCTGCA CAACGCCATG
AACCGGGTGG CTGACCTGTC GCGCCTGGTG GCTTGA
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| Protein sequence | MTTKNLLVEL FVEELPPKAL KKLGDAFAGV LAEQLKALGL ATAESVVTAY ASPRRLAAHI
SHVWLKADDK AVQQKLMPVS VGLDSAGHAT PALLKRLQAL GADLSDPVAA VAALKRAPDG
KAEALFYNSL VTGATLDTGL QKALEEAIAK LPIPKVMSYQ LETDCELPGW TSVNFVRPAH
GLVALHGSTV VPVKVLGLKA GNSTRGHRFE AAVDPVVLAD ADSYAVTLEI DGAVIASFAQ
RKAEIARQLA EAAAELGGGV QPIEDDALLD EVTALVERPN VLVCEFEKEF LDVPQECLIL
TMKANQKYFP LLDAAGKLTN KFLVVSNISP EDASFVIGGN ERVVRPRLAD AKFFFDQDRK
RTLASRVEGL GKVVYHNKLG TQGERTERVA EIAVKIAQLL EGDALAGKAG KAAWLAKADL
LTDMVGEFPE LQGTMGRYYA LHDGHSAEIA AAIEDHYKPR FAGDELPRNP VGVVVALADK
LETLVGMFGI GNLPTGDKDP FALRRHALGV IRMLVEKDLP LDLGALVGGA APVFGDKITD
ATPALLDFIY DRLSGSLREQ GYSAQEVDSV VSQKPQRLGD VPKRLAAVRA FAALPEAPAL
AAANKRIGNI LKKEALEVDP HVSELLLREA AEIALYAAMR DVVPTANAQF DTGDYTASLQ
TLAALRAPVD AFFDGVMVNA EELDLRLNRQ GLLKSLHNAM NRVADLSRLV A
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