Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0442 |
Symbol | |
ID | 4687978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 460542 |
End bp | 461681 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639833439 |
Product | L-asparaginases, type II |
Protein accession | YP_980685 |
Protein GI | 121603356 |
COG category | [E] Amino acid transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
TIGRFAM ID | [TIGR00520] L-asparaginases, type II |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.228079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCTTG CATCAGCTCG TCTGGCAATC CTGAAATCCC TATCAACCTT TGAGAAATAC CTCATGCAAA CGCAACTGCA ACTGAAAATC GCAAAACTCG TGACCGGCCT GGGACTGGCC GCCATGGCTT CCCTGGCCAT GGCGCAGGCC GCCAAGCCCA ATGTGGTGAT CCTGGCCACC GGCGGCACGA TTGCCGGCGC TGGCGCTTCG GCCCTGAACA GCGCGACCTA CGCGGCGGCC AAGGTGCCGG TGGACAAGCT GCTGGCGGGC TTGCCCGAAC TGGGCAACGT GGCCAATGTG CGCGGCGAGC AGGTGGCGCA GATCGCCTCC GAAAGCTTCA ACAACGAAAC CCTGATGAAG CTCGGCAAGC GCGTCTCGGC CCTCGTCAAG CAGGCCGATG TGGACGGCAT CGTGGTGACC CACGGCACCG ACACGCTCGA AGAAACCGCC TACTTCCTGA ACCTCGTGGT CCGCACCAGC AAGCCCATCG TGGTGGTCGG CTCGATGCGT CCCGGCACGG CGCTGTCCGC CGATGGCGCG CTGAACCTGT TCGACGCGGT GAGCGTGGCC GCCAGCAAGG ACGCAGCGGG CAAGGGCGTT CTGGTCACGA TGAACGACGA GATCAACAGC GGCCGCGACG TGGCCAAGCT GATCAACATC AAGACCGAAG CCTTCAAAAG CCAGTGGGGT CCGCTGGGCA TGGTGGTCGA AGGCAAAAAC TACTGGTTCC GCGCGCCGGT CAAGCTCCAC ACCGCCCAGT CCGAGTTCAA TATCGACGAT TTCGAAACGC TGGCGCCGGT CGAGATCGTG TACAGCTACG GCAATGTGTC CACCACCGCC GTGGACGCCG TGGGCAAATC CGGCGTCAAG GCGCTGATCC ATGCCGGCAC CGGCAACGGC TCGGTGGCCG CCGCCCTGGT ACCGTCGCTG CAAGCCATCC GCGCCCAGGG CGTGCAGGTG ATCCGCTCGT CCCGCGTGCC CGCCGGCTTT GTGCTGCGCA ACGCCGAGCA GCCCGACGAC AAGTACGACT GGGTGGTCGC GCATGACCTG AACCCGCAAA AAGCCCGCAT CCTGGCCGCC GTGGCATTGA CCAAAACCAC CGACAGCAAG GAGCTGCAGC GGATTTTCTG GCAGTATTGA
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Protein sequence | MGLASARLAI LKSLSTFEKY LMQTQLQLKI AKLVTGLGLA AMASLAMAQA AKPNVVILAT GGTIAGAGAS ALNSATYAAA KVPVDKLLAG LPELGNVANV RGEQVAQIAS ESFNNETLMK LGKRVSALVK QADVDGIVVT HGTDTLEETA YFLNLVVRTS KPIVVVGSMR PGTALSADGA LNLFDAVSVA ASKDAAGKGV LVTMNDEINS GRDVAKLINI KTEAFKSQWG PLGMVVEGKN YWFRAPVKLH TAQSEFNIDD FETLAPVEIV YSYGNVSTTA VDAVGKSGVK ALIHAGTGNG SVAAALVPSL QAIRAQGVQV IRSSRVPAGF VLRNAEQPDD KYDWVVAHDL NPQKARILAA VALTKTTDSK ELQRIFWQY
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