| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0352 |
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| Symbol | |
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| ID | 4689461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 347808 |
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| End bp | 349937 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639833345 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_980596 |
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| Protein GI | 121603267 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.877458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0118212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCAC CTTCTCCCGC ATCGCCCATC GCCCACGGCC TGAACCTGGC CCAGCAGGAA
GCCGTCAACT ACCTGCACGG CCCCTGCCTG GTGCTGGCCG GCGCCGGCTC GGGCAAGACA
CGCGTCATCA CGCACAAAAT CGGCCGGCTG ATCCAGATGG GCATGAAGCC CGAGCAGATT
GCCGCCATCA CCTTCACCAA CAAGGCCGCC GCCGAGATGC GCGAGCGCGC CAAAAGCCTG
ATCGGCAAGT CGGCCAAGGG CGTGCTGATC TGCACCTTTC ATGCGCTGGG CGTGCGCATG
CTGCGCCAGG ACGGTGCGGC GCTGGGCCTG AAACCGCAGT TTTCCATCCT CGACAGCGAC
GATGTGACCA GCATTTTGAA GGATGCGGGC GGCAGCACCG ACGTGGCCAC GGCGCGCCAG
TGGCAATGGA CCATCAGCGC CTGGAAAAAC CAGGGACTCA ACGCCGCGCA GGCCGAGGCG
CAGGCCAGCG GCGACGAGGA ACGCCTGATT GCGCGCGTGA TGGGCCACTA CGAAGAGCGC
CTCGCCGCCT ACCAGAGCGT CGATTTCGAC GACCTGATCG GCCTGCCGCT CAAGCTGCTC
AAGGAGCATG AAGACGTGCG CAGCAAATGG CAGGCGTCGC TCGGCCATGT TCTGGTCGAT
GAATACCAGG ACACCAACGC CACGCAGTAC GAAGTGCTCA AACTGCTGGT CGGCGAGCGC
GGCCGCTTCA CGGCGGTCGG CGACGATGAC CAGTCGATCT ACGGCTGGCG CGGCGCGACG
CTGGACAACC TGAAAAAGCT GCCGCAGGAC TTTCCGACCC TGAAGGTGGT CAAACTGGAG
CAGAACTACC GCTCGACCAG CGCCATCCTG CGCGCCGCCA ACAACGTCAT CGGCCCGAAC
CCCAAGCTGT TCCCGAAAAC CCTGTTCAGC GAACTGGGCG AAGGTGAGCC GGTGCGGGTG
GTCGATTGCG ACAGCGAGGA GCACGAGGCC GAACGCGTGG TGGCCCGCAT CCAGAGCCTG
CGCGCCGAAG GCAGCCTGCT GCCAGAAGGC AGGCAGTACC GCGAATGGAA GGACTTTTGC
GTGCTGTACC GGGCCAACCA CATGGCCAAG CCGTTCGAAA AAGCCTTTCG CAAGGCCAAT
ATTCCCTACA AGGTGTCGGG CGGCCAAAGC TTTTTCGACC GCGCCGAGAT CAAGGACCTG
TGCAGCTGGA TGGTCCTGCT GGTCAACAAC GACAACAACC AGGCCTTCAT CCGCTCCATC
AAGACGCCCA AGCGCGGCAT TGGCCACACC ACGCTGGGCG CGCTGAACAC CTTTGCCGAC
ACCTACAAGC TCAGCCTGTT CGAGTCGCTG TTCAGCAATT CGCTGGGCTC GGTGCTGCCG
GCCAAGGCGG TCGGTTCGCT GCAGGAATTT GGCCGCTATT TGAACGACCT CGAATACCGC
GCCAAGCGAT GCGTGGGCGC GGAAGATGCA CGCATTTTCC TGACCGACTG GCTCAAGGAA
ATCGACTACG AAAAGCACCT CTACGACGGC GAGGACAGCG AAAAGGTGGC TAGCGCGCGC
TGGAGCAACG TGATGGATTT TTGCGACTGG ATGTCCCAGC GCTGCGGCGG CCAGATTGAC
GACACCTCGG GCGCGACGAT TGAAAAACCG ACCAAGACCA TGCTCGAAGT GGTGCAAACG
ATTGCCCTGC TGTCCACCAT CAGCGAGCGC GAGGGCGACC AGAACGTCGT GACGCTCTCC
ACGCTGCACG CATCCAAGGG CCTGGAGTGG CCGCATGTGG TGCTTGCCGG TGTCAACGAA
GGCCTGCTGC CCTTCAAGCT GGACGACGAC GACGGCCAGA ACACCGACAG CATCGCGCTG
CGCCTGCAGG AAGAGCGCCG CCTGATGTAT GTCGGCATCA CTAGAGCCCA GCGCACGCTG
GCCGTGGACT GGCTGCGCAA GCGCAAGAAA GGCCGCGACC TGATCGCCGG CGTGCCCAGC
CGCTTCATCG CCGAAATGGC GCTGGACAAG GCGACCATCA AGGAAGACCC GCGCGAAAAG
CTCAAGGCCC TGCGCGCCGA ATTCGCCAAG AAATCCGCCG ATGGGCTGGC CGCGGCGGCA
GCGGCGAAAG CGGCTTACGA AGGCCGGTAA
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| Protein sequence | MSSPSPASPI AHGLNLAQQE AVNYLHGPCL VLAGAGSGKT RVITHKIGRL IQMGMKPEQI
AAITFTNKAA AEMRERAKSL IGKSAKGVLI CTFHALGVRM LRQDGAALGL KPQFSILDSD
DVTSILKDAG GSTDVATARQ WQWTISAWKN QGLNAAQAEA QASGDEERLI ARVMGHYEER
LAAYQSVDFD DLIGLPLKLL KEHEDVRSKW QASLGHVLVD EYQDTNATQY EVLKLLVGER
GRFTAVGDDD QSIYGWRGAT LDNLKKLPQD FPTLKVVKLE QNYRSTSAIL RAANNVIGPN
PKLFPKTLFS ELGEGEPVRV VDCDSEEHEA ERVVARIQSL RAEGSLLPEG RQYREWKDFC
VLYRANHMAK PFEKAFRKAN IPYKVSGGQS FFDRAEIKDL CSWMVLLVNN DNNQAFIRSI
KTPKRGIGHT TLGALNTFAD TYKLSLFESL FSNSLGSVLP AKAVGSLQEF GRYLNDLEYR
AKRCVGAEDA RIFLTDWLKE IDYEKHLYDG EDSEKVASAR WSNVMDFCDW MSQRCGGQID
DTSGATIEKP TKTMLEVVQT IALLSTISER EGDQNVVTLS TLHASKGLEW PHVVLAGVNE
GLLPFKLDDD DGQNTDSIAL RLQEERRLMY VGITRAQRTL AVDWLRKRKK GRDLIAGVPS
RFIAEMALDK ATIKEDPREK LKALRAEFAK KSADGLAAAA AAKAAYEGR
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