Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0338 |
Symbol | rpmD |
ID | 4688230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 337871 |
End bp | 338053 |
Gene Length | 183 bp |
Protein Length | 60 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639833330 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_980582 |
Protein GI | 121603253 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0500477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00104601 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCAAAG AAATCAAAGT AAAAGTCCAG CTGGTTCGCA GCCCGATTGG CACCCAGGAA TCACACCGCG CTACCGTGCG TGGTCTGGGC CTGCGTGGCG TCAACAGCGT CAGCGAATTG CAGGACACGC CCGCAGTGCG CGGCATGATC AACAAGATCA GTTATCTGGT CAAGGTTATC TGA
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Protein sequence | MTKEIKVKVQ LVRSPIGTQE SHRATVRGLG LRGVNSVSEL QDTPAVRGMI NKISYLVKVI
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