Gene Pnap_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0329 
Symbol 
ID4687961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp332614 
End bp334200 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content65% 
IMG OID639833321 
ProductFAD dependent oxidoreductase 
Protein accessionYP_980573 
Protein GI121603244 
COG category[C] Energy production and conversion 
COG ID[COG0578] Glycerol-3-phosphate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.74141e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00162584 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAATCG ATGCCTTGCC GGCCCGCACA CGGCGCAAGA ACCTGATAGA TCGGCTCGCC 
GAACCGCGTC ATTACGATGT CGCCGTTATC GGCGGCGGGG CAACCGGCCT GGGCGTGGCG
CTGGATGCTG CGGCAAGAGG GTTTTCCGTC GTGCTGGTCG AATCGCACGA CTTTGCCAAA
GGCACTTCGT CGCGCGCCAC CAAGCTGCTG CATGGCGGCG TCCGCTATCT GGCGCAGGGC
AATATTTCGC TGATCCGCGA AGCCTTGCAT GAACGCTCGA CGCTGCTGGC CAACGCGCCG
CACCTGGCGC AGCCGCTGCC TTTTGTCATG CCTTGCTACA AATTCTGGGA ATCGCCTGTT
TATGGACTAG GGCTCAAGAT GTATGACACC CTGGCCGGGA AGGATGGGCT GGGCGATACC
GAATTCCTGA ACCGCCCCGA AACCCTGGCG CACCTGCCAA CGCTCCAGCC GCAAGGCTTG
AAGGGCGGCG TCAAGTACTG GGACGGCCAG TTTGACGACG CGCGGCTGGC CCTGGCGCTG
GCCCGAACCG CTGCCCGGCA GGGTGCGCTG CTGGTCAATT ACTGCGCCGC CACCAAGCTG
ATCCATGAGG GCGGCAAGCT GGTCGGGCTG TGCGCGCTGG ACCGGGAAAC GGGCCATACC
CACGAATTGC ATGCCAGCTG CGTGGTCAAT GCCACGGGTG TCTGGGTTGA CCGGCTGCGG
ATGCAGGACG GCAAGGCCGT GGAATGCACG ACCAAACCGA TGGTCGCCCC CAGCCAGGGC
GTGCATATCG TGGTGGAGCG TGAGTTTTTG CCCACCGACC ATGCCCTGCT GATTCCCAGA
ACGTCTGATG GCCGGGTCTT GTTCGCCGTG CCCTGGCTGG GAAAAACCAT TCTTGGCACG
ACCGATACGC CGCGCCACAC CTTGGCGCGC GAACCGCTGC CGTTCCGGGA AGAGGTCGAT
TTCCTCCTGC GCGAGTCGGC CCGCTACCTG AGCCGCGCGC CAGGCCGGGC CGACATCAAG
AGCCTCTGGG TCGGACTGCG GCCGCTGGTC AAGCCGACTG ACGATGCTGC CGGCAGCACC
AAGACGCTGT CGCGCGAACA CACCGTGCTG GTCAGCAAGA GCGGCCTGGT CACGGTGACG
GGCGGCAAAT GGACAACTTA CCGCGCCATG GCGGGCGACG TGCTGGAAAA ATGCTTTGCC
GCCGGGCTGC TGCCGGCGCG TACCGGAATG CCGACAGACC ATCTCAAGCT GGTGGGTGCC
CAGCGCTCCA GCGTCAGGAT CAGCGAGGCG CCTGGGTTGC ACCTGTATGG AAGCGAAGCC
GGCGCGGTGC AGGCCTTGCG GGGCGCCGAT CATGAATTGG GCGGTGGCCT GACCGAGGCC
ATGGTTCGGT TTGCCGCCCG CCATGAATAT GCGCGTACCG TGGAGGATGT GCTGGCCCGG
CGCTCGCGGC TGTTGTTCCT GGACGCGGCA CTGGCGCGCA CCCTGGCGCC GGCAGTGGCA
GCCCTGCTCC AGCAGGAAAA CGGGATGGAC GCAAAACTGC AGTCCTTTTT GGCGCTGTGC
GATCAGTATT TGAGCGTGCC AGCCTGA
 
Protein sequence
MAIDALPART RRKNLIDRLA EPRHYDVAVI GGGATGLGVA LDAAARGFSV VLVESHDFAK 
GTSSRATKLL HGGVRYLAQG NISLIREALH ERSTLLANAP HLAQPLPFVM PCYKFWESPV
YGLGLKMYDT LAGKDGLGDT EFLNRPETLA HLPTLQPQGL KGGVKYWDGQ FDDARLALAL
ARTAARQGAL LVNYCAATKL IHEGGKLVGL CALDRETGHT HELHASCVVN ATGVWVDRLR
MQDGKAVECT TKPMVAPSQG VHIVVEREFL PTDHALLIPR TSDGRVLFAV PWLGKTILGT
TDTPRHTLAR EPLPFREEVD FLLRESARYL SRAPGRADIK SLWVGLRPLV KPTDDAAGST
KTLSREHTVL VSKSGLVTVT GGKWTTYRAM AGDVLEKCFA AGLLPARTGM PTDHLKLVGA
QRSSVRISEA PGLHLYGSEA GAVQALRGAD HELGGGLTEA MVRFAARHEY ARTVEDVLAR
RSRLLFLDAA LARTLAPAVA ALLQQENGMD AKLQSFLALC DQYLSVPA