| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0279 |
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| Symbol | |
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| ID | 4686585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 279280 |
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| End bp | 280515 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639833272 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_980524 |
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| Protein GI | 121603195 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGAC TCCAGGCTTT CAAATACGAA CTCGTGCCCA GCGGCGAGCA AACGCGCAAT
ATGCGCCGCT TTGCCGGAGC GCGCCGCTTT GTGTTCAACA AGGCACTGGC GCTGCAAAAG
GTAAATCACG GCGAAGGAAA GAAATTCATT GGCTACCTGG AGATGGCAAG ACACCTGATT
GCATGGAAGC AAGAGTTCCC CTGGCTCAAG GAATCCCCTT CCCAGGCCCT GCAGCAATCG
CTCAAGGACC TGGACAAAGC CTGGCAAAAC TTCTTTGCCA GGCGCGCCGG CTTTTCGCGT
CCCAAAAAGA ACGGTCGTGG CGAGAGTTTT CGCTTTCCGC AAGGTTTCAA GATCGACCAG
TCCAACAGCC GAATCTTCCT GCCCAAACTC GGCTGGATGC GCTATCGCAA CAGCCGGGAT
ATCCTGGGCA GCGCCAAGAA CATCACCCTC AGCGAAGCAG GCGGCAAGTG GTTTGCCAGC
ATCCAGACTG AACGAGAGCT GGAACAAGCC GTACCGACAA CTGCCAGCGC CATTGGCATC
GACGTAGGGA TAGCGCGCTT TGCCACCATG AGCGACGCCA GCTTTGTCGC CCCGCTGTGC
AGCTTCAAAA AGCATGAGAA ACGCCTGGCG AAATACCAGC GGCGCATGAG CCGCAAAACC
AGGTTCAGCA AAAACTGGCA CAAAGCCAAA AGGAAAGTTC AACGAATCCA CACCGATATA
GCCAACGCCC GAAAAGATTT CCTGCACAAG ACGACAAGCG ACCTCAGCCA AAACCACGCG
ATGGTCGCTA TCGAGGATTT GCAGGTACGC AACATGAGCA AATCGGCAGC GGGCAATGCA
GACAAGCCGG GCAAAAACGT CGCCGCCAAG TCCGGGCTGA ACAAAGCCAT CCTCGATCAG
GGCTGGTTTG AATTCCGGCG GCAGCTGCAG TACAAGCTCG ATTGGAACGG CGGCATTCTC
ATTGCCGTTC CCGCGCACTA CACCAGCCAG ACCTGTCCGT GCTGCGGGCA TGTGGCAAAG
GAAAACCGCC AAACGCAAGC CAGGTTCGAG TGCGTCGATT GCGGCTACGA GAACCACGCC
GATGTCGTCG GTGCAATGAA TATATTGGCG CGGGGATACC GCGCAGCAGC CTGTGGAGAT
GACGGCTCTG GCCTTGCGCG CAAGCGCAGG GCGCAACCAG CCTCGGTGAA GCAGGAACCC
GCCGAAGTGA CTATGCAAGA GGCAACTCAT GCGTAG
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| Protein sequence | MLRLQAFKYE LVPSGEQTRN MRRFAGARRF VFNKALALQK VNHGEGKKFI GYLEMARHLI
AWKQEFPWLK ESPSQALQQS LKDLDKAWQN FFARRAGFSR PKKNGRGESF RFPQGFKIDQ
SNSRIFLPKL GWMRYRNSRD ILGSAKNITL SEAGGKWFAS IQTERELEQA VPTTASAIGI
DVGIARFATM SDASFVAPLC SFKKHEKRLA KYQRRMSRKT RFSKNWHKAK RKVQRIHTDI
ANARKDFLHK TTSDLSQNHA MVAIEDLQVR NMSKSAAGNA DKPGKNVAAK SGLNKAILDQ
GWFEFRRQLQ YKLDWNGGIL IAVPAHYTSQ TCPCCGHVAK ENRQTQARFE CVDCGYENHA
DVVGAMNILA RGYRAAACGD DGSGLARKRR AQPASVKQEP AEVTMQEATH A
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