| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0254 |
|---|
| Symbol | |
|---|
| ID | 4687632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 256691 |
|---|
| End bp | 257557 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639833247 |
|---|
| Product | F0F1 ATP synthase subunit gamma |
|---|
| Protein accession | YP_980500 |
|---|
| Protein GI | 121603171 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0224] F0F1-type ATP synthase, gamma subunit |
|---|
| TIGRFAM ID | [TIGR01146] ATP synthase, F1 gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.85484 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAG GCAAGGAAAT ACGCGGCAAG ATCAAGTCGG TGGAAAACAC CCGCAAGATC
ACCAAGGCCA TGGAAATGGT GGCCGCCTCC AAGATGCGCA AGGCGCAGGA ACGGATGCGC
GCCGCCCGTC CTTACAGCGA CAAGATTCGT AACATTGCAG CTCACCTGAG TCAGGCGAAT
CCCGAATACA CCCATCCGTT CATGGAGTCC AATGACGCCA AGACCACCGG GTTTATCGTG
GTGACGACCG ACAAGGGCTT GTGCGGTGGT TTGAATACCA ATGTGCTGCG TCTCTTGACG
ACCAAGCTTA AGGACATGCA GGCTGCCGGT GAAGATGCGC AGGCGGTCGC CATTGGCAAC
AAGGGTTTGG GATTCCTGAA CCGCATTGGT GTCAAGGTCG CGGCGCATGC CACCCAGTTG
GGTGACAAGC CACACCTGGA CAAGCTGATC GGCCCCGTGA AGGTGTTGCT CGACGCGTAC
AGCGAAGGCA AGATCAAGGC GGTTTACCTC TGCTATACCC GCTTCATCAA CACGATGAAG
CAGGAATCCG TAGTGGAGCA ACTGTTGCCC TTGACGGCGG ACCGGATGCA GCCCGACAAG
ACCGAGCATA GCTGGGACTA CATCTACGAG CCGGACGCGC AAACCGTGAT TGACGAGCTG
CTGGTTCGCT ATGTCGAGGC ACTGGTGTTC CAGGCGGTGG CCGAGAACAT GGCTTCCGAG
CAGTCCGCCC GCATGGTCGC CATGAAGTCC GCTACCGACA ATGCCGGCAG CGTGATTGGC
GAACTCAAGC TGATTTACAA CAAAACGCGT CAAGCGGCGA TCACGAAAGA ACTTTCGGAA
ATCGTTGCTG GTGCCGCAGC GGTTTAA
|
|---|
| Protein sequence | MAAGKEIRGK IKSVENTRKI TKAMEMVAAS KMRKAQERMR AARPYSDKIR NIAAHLSQAN
PEYTHPFMES NDAKTTGFIV VTTDKGLCGG LNTNVLRLLT TKLKDMQAAG EDAQAVAIGN
KGLGFLNRIG VKVAAHATQL GDKPHLDKLI GPVKVLLDAY SEGKIKAVYL CYTRFINTMK
QESVVEQLLP LTADRMQPDK TEHSWDYIYE PDAQTVIDEL LVRYVEALVF QAVAENMASE
QSARMVAMKS ATDNAGSVIG ELKLIYNKTR QAAITKELSE IVAGAAAV
|
|---|
| |