| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0236 |
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| Symbol | |
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| ID | 4688929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 242106 |
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| End bp | 243377 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639833229 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_980482 |
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| Protein GI | 121603153 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.394936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATGAAG CCGTGACGCC AAAGGACGCC ATCGCCCTGC CGGACCGGCT GAACGCCAAA
TCGGCCACCC TCGTTTTTCT GGCCTTTGCC GCCGCATACT TCTGCTCGAC GCTGCTGCGC
GCCATCACCG CCACGCTGGC GCCGGTGCTG ACGCAGGAGT TTTCGCTGCA GGCGCAGGGC
CTGGGGCTGC TGGCGGGCGG CTATTTCCTG GGTTTTGCCG CCGTCCAGCT GCCGCTGGGC
CATTGGCTGG ACCGCCATGG CCCCAAGCGC GTCATTTTGT GGTTCCTGAG CCTGGCCGTG
CTGGGCTGCC TGGCCTTTTC AGCGGCCGGC AGTTTTACCG GGCTGCTGAT GGCGCGCGTG
CTGCTTGGCA TGGGCGTCGG TGCCTGCCTG ATGGCGGCGC TGACGGGTTA CCGGCGCTGG
TTTGACACGC CCGCGCTGCT GCGCGCCAAT TCGTGGATGC TGATGACCGG CTCGCTCGGC
ATGCTGGCCT CGACCCTGCC GGTGCAGTGG CTGATGCCGC TCATCGGCTG GCGGGCCTTG
TTCTGGTGTC TGGCGGCGCT GGTCGTGCTG TCGATGGCCG CGATTGCCTG GCTCGTTCCG
CGCTGGCGGG TGGCGCCCGC CGCGTCACCT TCAACGCCTG CGCTGTCGCA CGAGGCCGGT
TATGCAGCCA TCTGGCGCAG CCGCTATTTC CGCAAAATGG CGCCGCTGGC TTTTTTCAAC
TACGGCGGCA TGGTGGCGAT CCAGACGCTG TGGGCCGGTC CGTGGATGGT CAGGGTCGCC
GGCGACACGC CGCTGGAGTC GGCCACCGGC CTGTTCTGGA TCAACGCCAG CATGCTGGTG
ACCTTCTGGA GCTGGGGCCT GGTCAATCCG TACCTGGCCC GCAATGGCTG GCCGGCCACG
CGCCTGATCG CCTGGGGCGT GCCGCTCAGC CTGGCGGTGC TGGCCGGCAA CATCCTTGCC
GGCAGCGCCA CCGGCTGGCC GGGTTGGGCG CTGTTCTGCG TCACATCGAG CGTCATGGGG
CTGGCCCAGC CGGCCGTCGG CATGTCGTTC AGAGCCGCGC TGGCCGGGCG TGCGCTGTCG
GCCTTTAATC TGGTCATTTT TGCCGGGGTA TTTGTCGCGC AGTGGGGCCT TGGTTTGCTG
GTTGACGCTT TTTCCGCCCT GGGCCTGGCG CAGGGCGCCA GCTTTCAGGC GGCCATGACG
GTTTTTTTGT GTTGCTCTAT CGCCGCATAT GGCTACTTCA TCAGTGTGAA CGCCGATAAT
TCAGTGCAAT GA
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| Protein sequence | MNEAVTPKDA IALPDRLNAK SATLVFLAFA AAYFCSTLLR AITATLAPVL TQEFSLQAQG
LGLLAGGYFL GFAAVQLPLG HWLDRHGPKR VILWFLSLAV LGCLAFSAAG SFTGLLMARV
LLGMGVGACL MAALTGYRRW FDTPALLRAN SWMLMTGSLG MLASTLPVQW LMPLIGWRAL
FWCLAALVVL SMAAIAWLVP RWRVAPAASP STPALSHEAG YAAIWRSRYF RKMAPLAFFN
YGGMVAIQTL WAGPWMVRVA GDTPLESATG LFWINASMLV TFWSWGLVNP YLARNGWPAT
RLIAWGVPLS LAVLAGNILA GSATGWPGWA LFCVTSSVMG LAQPAVGMSF RAALAGRALS
AFNLVIFAGV FVAQWGLGLL VDAFSALGLA QGASFQAAMT VFLCCSIAAY GYFISVNADN
SVQ
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