| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0229 |
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| Symbol | |
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| ID | 4688042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 235990 |
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| End bp | 236928 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639833222 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_980475 |
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| Protein GI | 121603146 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.772545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.492978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTTA TCGACAGACA AGTTTCTGTA AAACCACCAC GATTCACCCC TTACCAGCTC
ACTCCCTGGT TCTTCGCGGC GCCAGCCCTG GTGCTGTTGT TCGTCTTTTT GATCCTGCCA
TTCGCGCTGG CGTTTGTCTT TTCCTTCACG GACCAGCGAT TGATCGGCAA CGACGAGCTG
GGAACCAGCT TTGTCGGTGT CCGCAATTAC ACGCGCCTCT TCGAAGACGA CAGCTTTTGG
GCGGCGCTGA GAAATAACTT CTTTTTTGTG TGCGTGGTGG CCCCATTGCA ATCCTTGAGC
GCACTGGGCC TGGCATTGCT GGTCAACCAG GCGCTGGCCG GCACGCGGTT CTTTCGCACC
ATCTATTTCA TGCCGGTGGC GACCACGATG GCGGTGGTCG CCGTTGTGTG GTCACTGCTG
TACAGCCCTG ATGCAGGGGT GATCAACCGT CTGGTCGGTC TGCTCAGCTT TGGCGCGGTA
GGGCCTCAAG ACTGGCTGCG CGACCCGGCG TTGGTCATGC CGGCGGTGAT GGTGCTGTCC
ATCTGGCAGG GCGTCGGCTT CCAGATGCTG GTCTTCCTGG CGGGCTTGCA GTCGATTTCG
GGCGACCTGT ACGAGGCTGC CAAGCTCGAT GGCGCCACGC CATGGAAGCA GTTTCGCTAC
ATCACGCTCC CCATGCTGAA GAACACCACG ATTTTCGTGC TGGTGACAAC GACGATCCAG
GCATTTCAGC TTTTCACGCA GGTGCAGATC ATTCAGGCCA GCGGTGCATC AGCCCCGGTG
GACAGCTTCC GAACCATGGT GATGCTGATG GTCCACGAAG GTTTTGGCAA CGGAAAGATC
GGCTACGCAT CGGGGGTCTC GGTCGTGTTC TTCGTAATCG TTTTGACCGT GTCACTGGTG
CAGCGTATCG TGCTGCGCGA AGAAAGGGCT GTGCAATGA
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| Protein sequence | MTFIDRQVSV KPPRFTPYQL TPWFFAAPAL VLLFVFLILP FALAFVFSFT DQRLIGNDEL
GTSFVGVRNY TRLFEDDSFW AALRNNFFFV CVVAPLQSLS ALGLALLVNQ ALAGTRFFRT
IYFMPVATTM AVVAVVWSLL YSPDAGVINR LVGLLSFGAV GPQDWLRDPA LVMPAVMVLS
IWQGVGFQML VFLAGLQSIS GDLYEAAKLD GATPWKQFRY ITLPMLKNTT IFVLVTTTIQ
AFQLFTQVQI IQASGASAPV DSFRTMVMLM VHEGFGNGKI GYASGVSVVF FVIVLTVSLV
QRIVLREERA VQ
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