| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0227 |
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| Symbol | |
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| ID | 4687472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 233340 |
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| End bp | 234614 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639833220 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_980473 |
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| Protein GI | 121603144 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.998322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.257108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGA AATATTCGGG ATTTATGGCT GCGCTGACAG CAACACTCGC CACCGCCATG
CCGGTGCAGG CTCAGACCAT GGTGACGATG TGGGTGCATG CCGGGCCAGG CCCTGAGGCG
GTTGCCTACT CCGCAGCGAC AGATGCCTTC AACGCGCAGA ACAAGGACAT CAAGCTTGAC
CTCGTGAAGT TGCCCGAAGG CAGCTACAGC AACCAGGTGA GTGCTGCTGC ACTTGCCCGC
AAGCTGCCCT GCCTGTTGGA CTTCGATGGT CCTAACGTCT ACAACTACGC ATGGACGAAG
AAGATCATCC CGCTGGACAC TTTTCCGGAG TTGGTCGCGG TAAAAGCAGA CCTGCTTCCA
TCGCTGCTTC GCCAGGGAAC TTACGGCGGA AAACTCTACA GCTTGGGCCA GTTTGACTCA
GGTCTGGGAA TCTGGGGCAA CAAAAAGCTG CTCGAAAAGG CGGGGGTGCG TATCCCTGGC
TCTGTGCTCG AGGCGTGGAC GCTCGCCGAG TTCGAGGACG CGCTGAAGAA GCTCAAAAGC
AGCGGTGTGG CCGCTCCGTT GGACATGAAG TTCAACTATG GCGTCGGAGA GTGGTTCACC
TATGGTTTCT CGCCAATCGT GCAGAGCTTT GGCGCAGACC TGATCGACCG CAAGACATTT
AAATCCTCCA AGGGAGTGAT CAATGGCGAT GCCGCGGTGA AAGCGCTGAC CACGCTGCAG
GGCTGGGTCA AGGCGGGTTA CGTGAATCCT GCCACCAAGG ATGACGGCGA CTTTATCAAG
GGCAAGGCGG CGCTGTCCTA TGTGGGCCAC TGGACCTTCA AGGACTACAA GAAGGCGCTC
GGTGATGATC TGGTGCTGAT TCCCATGCCG GCCTTCGGCG CCAAGCCGGT GACTGGCGCT
GGCTCATGGA ACTTCGGCAT CTCGGCCGAC TGCAAGGATC CGAAGGCGGC AGCCAAGGTG
CTGGCCCATC TGATGTCAAC CCCGGAGATC CTGCGCGTGA CCGAGGCAAA TGGTGCAATG
CCTGGAACCA ATTCAGCGCT GGCCCAGAGC AGGGACTACG GTGTCAAGGG CGGCTTGAAC
ATTTATGTAC AGCAGGTTCG CCAGGGAGTG GCGCTGGTAC GCCCTGAAAC GCCGGCTTAT
CCGGCCATCA GCACGGCCTT TGCCGAGGCG TTAAACAACA TTGTGGCGGG CGCTGACGTC
CAAAAGGAGC TCGACCGCGC CTCCAAAAAG ATCGACCAGA ACATAGAGGA CAACAAGGGT
TACCCGATCA AGTGA
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| Protein sequence | MKQKYSGFMA ALTATLATAM PVQAQTMVTM WVHAGPGPEA VAYSAATDAF NAQNKDIKLD
LVKLPEGSYS NQVSAAALAR KLPCLLDFDG PNVYNYAWTK KIIPLDTFPE LVAVKADLLP
SLLRQGTYGG KLYSLGQFDS GLGIWGNKKL LEKAGVRIPG SVLEAWTLAE FEDALKKLKS
SGVAAPLDMK FNYGVGEWFT YGFSPIVQSF GADLIDRKTF KSSKGVINGD AAVKALTTLQ
GWVKAGYVNP ATKDDGDFIK GKAALSYVGH WTFKDYKKAL GDDLVLIPMP AFGAKPVTGA
GSWNFGISAD CKDPKAAAKV LAHLMSTPEI LRVTEANGAM PGTNSALAQS RDYGVKGGLN
IYVQQVRQGV ALVRPETPAY PAISTAFAEA LNNIVAGADV QKELDRASKK IDQNIEDNKG
YPIK
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