| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0223 |
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| Symbol | |
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| ID | 4686669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 228149 |
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| End bp | 229396 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639833216 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_980469 |
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| Protein GI | 121603140 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.16835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCAC TCAATGGCAT CCGCATTCTC GATTTATCCC GCGTGCTCGC GGGCCCGTGG
TGTACCCAGA CGCTGGCCGA CCTGGGGGCC GACGTCATCA AGATCGAGCG CCCCGGCAGC
GGCGACGACA CCCGCACCTG GGGGCCGCCG TTCCTGAAGG ACGACGAAGG AGCGGAGACG
CACGAAGCCG CCTACTACCT GGGCGCCAAC CGCAACAAGC GCTCGGTCAC CTGTGACATC
GCCAAACCCG ACGGCCAGGC GCTGATCCGC GAGTTGGCCC GGCATTGCGA TGTGTTCGTC
GAGAACTTCA AGGTCGGCGA CATGGCGCGC TACGGCCTGG ACTATGCATC GCTCAAGCTG
CTGAACCCGC GCCTGGTGTA CTGCTCGGTC ACCGGCTTTG GGCAAAACGG GCCGTATGCC
GAACGCGCCG GCTACGACTA CGCCATCCAA GGCATGGGCG GGCTGATGAG CGTGACCGGC
GAGCGCGACG ACCTGGGCGG CGGCCCGCAA AAAGTCGGCG TCGCCGTGGC CGACCTGATG
ACCGGCATGT ACGCCACCGT CGGCATCCTG GCCGCCCTGC GCCATGCCGA AAAAACCGGC
GTTGGCCAGC TGGTGGACCT GGCGCTGCTC GACACCCAGG TCGCCATGCT GGCCAACCTG
GGCGCCAACT ACCTGGTCAG CGGCAAGGTG CCGCAGCGCG TGGGCAATGC GCACATGAAC
ATCGTGCCCT ACCAGGTGTT CGAGGTCGCG CCCGCAGCCG ACGGCAGCAA GGACCACCTG
ATCCTGGCGG TCGGCAACGA CGCGCAGTAC GTGAAGTTCT GCGCCATCGC GGGCATTCCC
GAACTCGGCG TGAACCCGCT GTTTGCCAAG AACCGCGACC GCGTGCACAA CCGCGCCCAA
CTGGTGCCGA TTCTGGAAAG CGTCATGAAA CTGCGCGGCA AGGCCGACTG GCTGGCCGCG
CTGGAGGCGG CCAAGGTGCC GTGCGGCGCC ATCAACAACC TGGCCGAGGT GTTTGCCGAC
CCGCAGATCG AAGCGCGGGA CATGGTCACC CACTGGCGGC ATCCGCTCAA GAGCGACCTG
CCGCTGGTGG CCAGCCCGAT CAAGCTCAGC GCCACGCCGG TGCGCACGCC GGGCCAGGGC
GGCCTGCCGC CGCCGCTGCT CGGCCAGCAC ACCGAAGAAG TCCTGCGCGA GCTGCTGGAC
TACTCCGACG CGCAACTGTC CCAACTCAAA ACCGCGCGGG TGATCTGA
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| Protein sequence | MNSLNGIRIL DLSRVLAGPW CTQTLADLGA DVIKIERPGS GDDTRTWGPP FLKDDEGAET
HEAAYYLGAN RNKRSVTCDI AKPDGQALIR ELARHCDVFV ENFKVGDMAR YGLDYASLKL
LNPRLVYCSV TGFGQNGPYA ERAGYDYAIQ GMGGLMSVTG ERDDLGGGPQ KVGVAVADLM
TGMYATVGIL AALRHAEKTG VGQLVDLALL DTQVAMLANL GANYLVSGKV PQRVGNAHMN
IVPYQVFEVA PAADGSKDHL ILAVGNDAQY VKFCAIAGIP ELGVNPLFAK NRDRVHNRAQ
LVPILESVMK LRGKADWLAA LEAAKVPCGA INNLAEVFAD PQIEARDMVT HWRHPLKSDL
PLVASPIKLS ATPVRTPGQG GLPPPLLGQH TEEVLRELLD YSDAQLSQLK TARVI
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