Gene Pnap_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0213 
Symbol 
ID4686872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp219963 
End bp220469 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content62% 
IMG OID639833206 
Productredoxin domain-containing protein 
Protein accessionYP_980459 
Protein GI121603130 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0678] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.15886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAG TAGGCGATAC CCTTCCCGCA GCCACGCTGA TGGAATTTGT CGAAGTCGAA 
GGCAACGGCT GCAGCCTCGG GCCCAATCCG GTCGATGTGG CCCAGGCCAG TGCCGGCAAG
ACGATTGCCC TGTTTGCCGT GCCAGGCGCT TTCACGCCGA CCTGCTCGGC CAAGCATGTG
CCCGGTTATG TCGCGAAGTT CGCCGAATTC AAGGCCGCTG GCGTCGATGA AATCTGGTGC
CTCAGCGTGA ACGATGCGTT CGTGATGGGC GCCTGGGCGC GCGACCAGAA AACCGAGGGC
AAGGTACGCA TGCTGGCCGA TGGCGATGCC GCTTTCGCCC AAGCCACCGG CCTGACGCTG
GACCTGAACG GCAAGGGTCT TGGCCTGCGC AGCAACCGCT ACTCGATGCT GGTCAAGGAT
GGCAAGGTCG CGAGCCTGAA TATCGAAGGG CCGGGCAAGT TTGAAGTCAG CGATGCGGAT
ACGCTGCTGG CGCAAGTCGC TGCCTGA
 
Protein sequence
MIKVGDTLPA ATLMEFVEVE GNGCSLGPNP VDVAQASAGK TIALFAVPGA FTPTCSAKHV 
PGYVAKFAEF KAAGVDEIWC LSVNDAFVMG AWARDQKTEG KVRMLADGDA AFAQATGLTL
DLNGKGLGLR SNRYSMLVKD GKVASLNIEG PGKFEVSDAD TLLAQVAA