| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0204 |
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| Symbol | rplD |
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| ID | 4689949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 215554 |
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| End bp | 216174 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639833197 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_980450 |
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| Protein GI | 121603121 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTCG AACTCCTGAA TGACCAGGGT CTGTCATCGT CCAAAGTGGA CGTGTCCGAC
ACCGTTTTTG GTCGCGAATA CAACGAAAGC CTGATTCATC AGGTGATCGT GGCCTTCCAG
GCCAACGCCC GCCAGGGCAC CCGTGCCCAG AAGGACCGTG AGCAGGTTCG TCACTCGACC
AAGAAGCCTT TTAAACAAAA GGGCACTGGC CGCGCACGTG CAGGTATGAC GTCTTCCCCG
CTGTGGCGCG GAGGCGGTCG TATTTTCCCG AACATGCCTG ATGAAAACTT CACGCACAAG
ATCAACAAGA AAATGTATCG TGCCGGCATG GCTTCGATCT TTTCGCAGCT GGCGCGCGAA
GGCCGCCTGG CTGTGGTTGA TTCCCTGACC GTGGATTCAC CCAAGACGAA AGTTCTGGCT
GACAAATTCA AGGCCATGAA CCTCAACTCG GTGCTGGTGA TTGCTGATCA GGTTGATGAA
AACCTGTACC TGGCATCGCG CAATCTGGTC AACATCCTGG TTGTTGAGCC CCGCTATGCC
GACCCGCTGT CACTGGTGCA CTACAAAAAG GTGCTCGTGA CCAAGGCTGC CATGGACCAA
CTCAAGGAGA TGTTCGCATG A
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| Protein sequence | MQVELLNDQG LSSSKVDVSD TVFGREYNES LIHQVIVAFQ ANARQGTRAQ KDREQVRHST
KKPFKQKGTG RARAGMTSSP LWRGGGRIFP NMPDENFTHK INKKMYRAGM ASIFSQLARE
GRLAVVDSLT VDSPKTKVLA DKFKAMNLNS VLVIADQVDE NLYLASRNLV NILVVEPRYA
DPLSLVHYKK VLVTKAAMDQ LKEMFA
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