| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0198 |
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| Symbol | rpsL |
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| ID | 4687664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 209585 |
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| End bp | 209962 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639833191 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_980444 |
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| Protein GI | 121603115 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000216597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAACCA TCAATCAATT AGTTCGTCAG GGGCGCGAGG TCGAAAAGAT CAAGTCAAAA
AGCCCTGCGA TGGAAAATTC TCCACAGCGC CGCGGTGTTT GCACCCGTGT TTACACCACG
ACGCCTAAAA AGCCAAACTC CGCTCTGCGT AAAGTCGCCA AGGTGCGCCT GACCAACGGG
TTCGAGATCA TTTCCTACAT CGGCGGCGAA GGCCACAATC TGCAGGAACA CAGCGTGGTG
CTGGTTCGCG GCGGCCGGGT CAAGGATTTG CCGGGTGTGC GTTACCACAT CGTTCGTGGC
TCGCTCGATT TGCAAGGCGT GAAAGACCGC AAGCAGTCGC GTTCCAAGTA CGGCGCGAAG
CGTCCAAAGG CCAAATAA
|
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| Protein sequence | MPTINQLVRQ GREVEKIKSK SPAMENSPQR RGVCTRVYTT TPKKPNSALR KVAKVRLTNG
FEIISYIGGE GHNLQEHSVV LVRGGRVKDL PGVRYHIVRG SLDLQGVKDR KQSRSKYGAK
RPKAK
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