| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0197 |
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| Symbol | |
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| ID | 4686724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 208232 |
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| End bp | 209440 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639833190 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_980443 |
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| Protein GI | 121603114 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00107938 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.937465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATGCT TCCTCAAGGC CCCCGCCGGC CTGCGCGGCC TCGCCGCCAC TTTCGTCCTG
CTTGTCTCGG TGGCGCTTCC CGCCGCGCAT GCCCAGGCAC CGCAGGTGCC TGAAATCGCC
GCACGCTCCT ATCTGCTGCT CGACGTCACG GCCAACCAGA TCCTGGCCGC CAAGGACATC
GATTCTCCGG TCGAGCCGGC GTCGCTGACC AAGCTGATGA CCGAATACCT GGTGTTCGAT
GCGCTCAAGT CCAAGAAGAT CACGCTCCAG CAGACCTTCG GCGTCAGCCA GCGCGCCTGG
AAAATGCCGG GTTCGCGCAT GTTCATCGAC CCGAAAATGC AGGTTCCGGT CGAAGACTTG
ATCAAGGGCA TGATCGTGCA GTCGGGCAAC GACGCCACCA TGGCGCTGGC CGAGGGCGTG
GGCGGAACGG CCGAGCATTT CGTGGAGCTG ATGAACCAGC AGGCCAAGGC GCTGGGCATG
AAATCGACCA GCTACAAAAA CCCCGAAGGC CTGACCGAAG CCGGCCACAT CACCACGGCG
CGCGACCTGA GCATTTTGTC CACCCGCCTG ATGAGCGACT TCCCTGATTA CATCGGCTAC
TCGGCCATCA AGAAGTACCG CTACCCCGGC ACGCCAGCCA CCAACGACAC CAACCGCAAC
ACGCTGCTGT TTCGCGACCC GACGGTCGAT GGCCTGAAAA CCGGCCACAC CAACGCTGCC
GGCTATTGCA TGATTGCCAC GGCCAAGCGC GAATTTCCCA ATCTGGGCGC AGCCGGCAAG
CCCGGCGGCA GGCGCCTGCT GGCCATCGTG CTGGGAACCA CCAGCGACAG CGCCCGCGCG
ACCGAGTCGC AAAAACTGCT GAACTGGGGT TACACCGCCT TCGAAGCGGT CAAGCTGTTC
GATGCCGGCC AGGCGGTGGT GACGCCTGCG GTCTGGAAAG GCAAGGACGC GGTCGTCAAG
CTGGGTCGTC CCGAAGCGAT CGTGGTGGCT GTGACGGCCG GCAGCGCCTC CAGGCTCAAA
ACCCAGGTGG CCCGGCCCGA GCCGCTGGTC GCGCCCTTCA AGAAGGGCCA GCCGGTGGGC
AGCCTGAAGA TCATGCTGGG CGACAACCCC GCGCCCATGG CCGAAGTGCC GCTGGTGGCG
CTGGAAACCG TCGAAGAAGC CGGCATCATG GGCCGCGCCT GGGATTCGAT CCGGCTGTGG
ATCAAGTAA
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| Protein sequence | MQCFLKAPAG LRGLAATFVL LVSVALPAAH AQAPQVPEIA ARSYLLLDVT ANQILAAKDI
DSPVEPASLT KLMTEYLVFD ALKSKKITLQ QTFGVSQRAW KMPGSRMFID PKMQVPVEDL
IKGMIVQSGN DATMALAEGV GGTAEHFVEL MNQQAKALGM KSTSYKNPEG LTEAGHITTA
RDLSILSTRL MSDFPDYIGY SAIKKYRYPG TPATNDTNRN TLLFRDPTVD GLKTGHTNAA
GYCMIATAKR EFPNLGAAGK PGGRRLLAIV LGTTSDSARA TESQKLLNWG YTAFEAVKLF
DAGQAVVTPA VWKGKDAVVK LGRPEAIVVA VTAGSASRLK TQVARPEPLV APFKKGQPVG
SLKIMLGDNP APMAEVPLVA LETVEEAGIM GRAWDSIRLW IK
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