Gene Pnap_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0193 
Symbol 
ID4689549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp205309 
End bp205737 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content63% 
IMG OID639833186 
Producthypothetical protein 
Protein accessionYP_980439 
Protein GI121603110 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.115967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTGGG TCAAATCCTT TCACATCGTC TTCATTGCCA GCTGGTTTGC CGGGCTTTTC 
TACCTGCCGC GCATTTTCGT CAACCTGGCC ATGGTGCCGC CGCACAGCAT CGCCGAGCGC
GAGCGGCTGA TCCTGATGGC CGGCAAGCTG ATGCGTTTCA CCACCCTCCT GGCCATTCCG
GCCGTGGCTC TGGGTCTGTG GCTGTACCTG GGCTACGGCA TCGGGCGCGG GCCGGGCAAC
GGCTGGATGC ATGCCAAGCT GGCCGTGGTG GCGCTGGTGA TCGGCTATCA CCATGCCTGC
GGCCGGATGC TGGCCAAGTT CGTCGCCAAG CGCAACACCC ACAGCCATGT CTGGCTGCGC
TGGTTCAACG AAGTGCCGGT GCTGCTGCTG GTGGCCGCTG TCATTCTGGT GGTGGTCAAG
CCGTTCTGA
 
Protein sequence
MLWVKSFHIV FIASWFAGLF YLPRIFVNLA MVPPHSIAER ERLILMAGKL MRFTTLLAIP 
AVALGLWLYL GYGIGRGPGN GWMHAKLAVV ALVIGYHHAC GRMLAKFVAK RNTHSHVWLR
WFNEVPVLLL VAAVILVVVK PF