| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0151 |
|---|
| Symbol | |
|---|
| ID | 4686428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 161900 |
|---|
| End bp | 162625 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639833144 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_980397 |
|---|
| Protein GI | 121603068 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACAAC AGCTTTTGAT GATCGAAGAC GACACCCGCC TGGCCAGCAT GGTGGGCGAA
TACCTGCGCC AGTCCGGCTA TGGCTTTGCC CACGCCGCCA CCGGCACGGC CGGCCTGGAA
GCGCTGCAGG CTACCCCGCC CGACCTGGTG ATCCTGGACC TGATGCTGCC CGACATGGAC
GGCCTGGAAG TGTGCCGCCG CATCAAGGGG CGCGGCGGCG ACGCGGCCCG CACCGCCGTC
TTGATGCTGA CGGCCAAGGG CGACCCGATG GACCGCATCG TCGGCCTGGA AATCGGCGCC
GACGACTACC TGCCCAAGCC CTTCGAGCCG CGCGAGCTGC TGGCGCGCAT CCGCGCCGTG
CTGCGCCGGG GCGGCAACAG CAACGGTAAC GGCGGCGGCG CGCCAGCGGA CGGCCACAAG
GTGATGCGTT TCGGCTCGCT GGAAATCGAC CGCGATGCGC GCGCCGTGAC CGTCTCGGGC
AACCCGTGCG AGCTGACCTC CTACCAGTTC GACCTGCTGG TGGCGCTGGC CGAGCGCGCC
GGCCGCGTAC TGAGCCGCGA CCAGATCATG GAAGCCGTGC GCGGGCGCGA ACTCGAAGCC
TTCGACCGTT CGATTGACGT TCACATGGGC CGCATCCGCA GCGCCATCGA GGCCGACGCC
AAGGACCCCA AGCGCATCCT GACAGTGCGC GGCGTGGGCT ATGTATTTGC CAAGCAGCAA
GACTGA
|
|---|
| Protein sequence | MTQQLLMIED DTRLASMVGE YLRQSGYGFA HAATGTAGLE ALQATPPDLV ILDLMLPDMD
GLEVCRRIKG RGGDAARTAV LMLTAKGDPM DRIVGLEIGA DDYLPKPFEP RELLARIRAV
LRRGGNSNGN GGGAPADGHK VMRFGSLEID RDARAVTVSG NPCELTSYQF DLLVALAERA
GRVLSRDQIM EAVRGRELEA FDRSIDVHMG RIRSAIEADA KDPKRILTVR GVGYVFAKQQ
D
|
|---|
| |