| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0111 |
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| Symbol | |
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| ID | 4689862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 117376 |
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| End bp | 118578 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639833104 |
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| Product | threonine dehydratase |
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| Protein accession | YP_980357 |
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| Protein GI | 121603028 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.577091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0541762 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGCC TGACCGTTAT CGAACAAGCC GCCCAGCGCC TGCACGGACA TTTGCTGGAC
ACGCCCTGCG TGGAATCGCG CACGCTGTCG CAGTTGACCG GGGCGCAAAT TTACCTGAAG
TTCGAAAACC TGCAGTACAC CGCGTCCTTC AAGGAGCGCG GCGCCTGCAA CAAGCTGGCG
CAGCTCACCG AGTCCGAGCG CCAGCGCGGC GTGATTGCCA TGAGCGCGGG CAACCATGCG
CAGGGCGTGG CCTACCACGC GCAGCGCCTG GGCATTCGCG CCGTCATCGT CATGCCGCGC
TTCACGCCGG GCGTGAAGAT CGAGCGCACC CGGGGCTTTG GCGCCGAGGT GGTGCTGCAC
GGCGACACGC TCGACGCGTC GCGCGCCCAT GCCATGGGGC TGGCCGAACG CGAAAAGCTG
GTGTTTGTGC ATCCCTATGA CGATGAAGCC ATCGTCGCCG GCCAGGGCAC CGTGGGGCTG
GAGATGCTGC ATGCCGTGCC CGAACTGGAA GTGCTGGTGA TTGCCGTGGG CGGCGGCGGG
CTGATTGCCG GCGTGGCCAC GGCGGCCAAG GCGCTGAAAC CCGGCATTGA AATCATCGGC
GTGCAGACGT CGCGCTTTCC AGCCATGGTC AACGCCATCA AGGGCACGCA CCACCCGCAG
GGCACCAGCA CGATTGCCGA CGGCATTGCC GTGGGCACGC CCGGCGTGAT TGCGCAGGCT
ATCATTGCCG AAAAAGTCGA TGACCTGCTG CTGGTCGATG AAGGCGACAT CGAGCAGGCC
ATGGTGATGC TGCTGGAGAT TGAAAAAACC CTGGTCGAAG GCGCTGGCGC GGCCGGGCTG
GCGGCGCTGC TCAAATACCC GGCGCGCTTT GCCGGCCGCA AGGTCGGGCT GGTGCTGTGC
GGCGGCAACA TCGACCCGCT GCTGCTGGCA GCGATCATTG AGCGCGGCAT GGTGCGCGCC
GGGCGGCTGG CGCGCATCCG GGTCAGCGCG CGCGACATTC CCGGCTCGCT GGCCAAAATC
ACCGCCACGG TCGCCGACGC GGGCGCCAAC ATCGAGGAAG TGCACCACCA GCGCGCCTTC
ACCATGCTGG CGGCGCAGAA CGTTGAGATT GAACTGGTGC TGCAGACGCG CGGCCGCCCG
CATATCGCGC AGGTGCTGCA GGCTTTGCGC ACGGCGGGAT TCGAGGCTGA AGAGCAGCAC
TGA
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| Protein sequence | MLSLTVIEQA AQRLHGHLLD TPCVESRTLS QLTGAQIYLK FENLQYTASF KERGACNKLA
QLTESERQRG VIAMSAGNHA QGVAYHAQRL GIRAVIVMPR FTPGVKIERT RGFGAEVVLH
GDTLDASRAH AMGLAEREKL VFVHPYDDEA IVAGQGTVGL EMLHAVPELE VLVIAVGGGG
LIAGVATAAK ALKPGIEIIG VQTSRFPAMV NAIKGTHHPQ GTSTIADGIA VGTPGVIAQA
IIAEKVDDLL LVDEGDIEQA MVMLLEIEKT LVEGAGAAGL AALLKYPARF AGRKVGLVLC
GGNIDPLLLA AIIERGMVRA GRLARIRVSA RDIPGSLAKI TATVADAGAN IEEVHHQRAF
TMLAAQNVEI ELVLQTRGRP HIAQVLQALR TAGFEAEEQH
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