Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0100 |
Symbol | |
ID | 4687066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 106815 |
End bp | 107771 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639833093 |
Product | LysR family transcriptional regulator |
Protein accession | YP_980346 |
Protein GI | 121603017 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.183121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.148828 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCCTC CCAATTTCCG CACCCTGGAC CTCAACCTGC TGCGTGTTTT TGACGAGGTC ATGGCCGAGC GCAGCCTCAC GCGGGCGGCG CGCAACCTGT CGCTGACGCA GCCGGCCGTC AGCAATGCCC TGCGCCGGCT GCGCGAGACG CTGGGCGACG ATCTGGTGCA GCGCAGCGGC CAGGGCATGG CGCCCACGCC ACGCGCGGTG GTGATCTGGC CGGCCGTGCG CGAGGCCCTG CGGCAGCTGC AGGCGTCGCT GATTCCCAAC GAGTTCGTTG CCGCCGAGGC GACGACCGCC TTTGTGCTGG CCATGGCCGA CGCGACGGCG GCCGAACTGA TCCCGGGCCT GAGTGAAATC CTGGAGCGCG AAGCCCGGGG CGTGAGCATC CGGGTGCTGC CGCTGACCAC GCGCGACCCC AGGCGGATGC TCGACGAGCA AGCCTGCGAT CTGGCGGTCG GCTATTTCCC GTCGGTGGTG CCCGACCTGA CGGCCAAGGA GCAGAACGGC GAGGCGATGC CGTTTTTCTT CCAGCGGCTG TACGATGGCG AATATGTCTG CGTGATGCGC AAGGACCATC CGCTGGCTGG CGGCGTGCTG AGCCTGGACG ACTTTTGCAA CGCCCGCCAC ATGCTGGTGA GTTTTTCCGG CCGGCCTTAC GGGTTCATCG ACGAATCGCT GGCCGCGCTC GGCCGGGAGC GGCGGGTGGT GCTGACGGTG AACCAGTTCT TCACCGCCGG CCAGGTGGTG GCCCATTCCA ACCTGCTGAC CGTGCTGCCA CGGCATTTTG TACGGGTGAC CGGCATTGCC GAGCAACTGG CGCTGCAGAC CCTGCCGTTT GCCGTGTCGC CGGTGCATGT CGATTCGCTA TGGCACCGTC GCTCCGAGCA GCGCAGCGCG CATGTCTGGC TGCGCCAGGC GATCCTGCGG GCGGCCGAAA AGGCTTTTTC GATCTGA
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Protein sequence | MTPPNFRTLD LNLLRVFDEV MAERSLTRAA RNLSLTQPAV SNALRRLRET LGDDLVQRSG QGMAPTPRAV VIWPAVREAL RQLQASLIPN EFVAAEATTA FVLAMADATA AELIPGLSEI LEREARGVSI RVLPLTTRDP RRMLDEQACD LAVGYFPSVV PDLTAKEQNG EAMPFFFQRL YDGEYVCVMR KDHPLAGGVL SLDDFCNARH MLVSFSGRPY GFIDESLAAL GRERRVVLTV NQFFTAGQVV AHSNLLTVLP RHFVRVTGIA EQLALQTLPF AVSPVHVDSL WHRRSEQRSA HVWLRQAILR AAEKAFSI
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