| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0094 |
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| Symbol | |
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| ID | 4689780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 97385 |
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| End bp | 98752 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639833087 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_980340 |
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| Protein GI | 121603011 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.79359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCG TGGTCTTGGG CGCGGGCATT ATCGGCGTGA GCACCGCCTG GCATTTGCTG
GAGCGCGGGC ATGAAGTCAC GGTGGTGGAC CGGCAGCCCG ACGCCGCGCT GGAGACCAGC
TTTGCCAATG CCGCGCAGAT TTCCGTCAGC TACTGCGAGC CCTGGGCCAA CCGGGACGCG
CCGCTGAAGG CGCTGAAATG GATGCTGCGC GACGATGCGC CGCTGCTGTT CAGGCCCCGG
CTGCCGTTTG GCGAAGGCTG GCAGCAATGG CGCTGGGGCC TGCAGTTTTT GGCGCAGTGC
AACGACGCCG CCTTCGAGCG CAACGTGCAG CAGCTCGTCG CGCTGGGCGC CTACAGCCAC
GCCGCGCTCA AGGACGTGGT GCGCGCCACC GGCATCGAGT ACAACCGGCT GGAGCGCGGC
ATCGCCCACT ACTACACCGA GCAGAAATCG TTCGACACCG CCGGCGACGC GGCCGCGCTG
ATGCGCAAAT ACGGCGTGGC GCGCCGGGTG GTTTCCACCG CCGAGCTGCT GAAGATCGAG
CCGGCCTTCA GCGCCTTTGC CGACCGCATC GTCGGCGGCA CCTACACCGC CAGCGACGAA
AGCGGCGATG CCCGGGTCTT CACCCAGGCG CTGGCGCAGC GCTGCGCCGA ACGCGGCGTG
CAATTTTTAT ACAGCCATGA CGTGGTGCGG CTTGAGAAAA CCGGCAATGC TATTAATTCA
GTAGCTATAC GCGCCCGTGG CACAAGCATA AAAGGCCAAA ATGATGCCAA AGTCACGCCA
TTGACGCAGC TGAAGGCCGA TGCGGTGGTG GTGGCCTGCG GCTCCTACAC CGCGCCGCTG
CTGCGCACCG TCGGCGTTGA TCTGCCGATT TATCCGGGCA AGGGCTACAG CGCGACCTTC
AAGCTGCTCA AACCCGAGCT GGCGCCCTTT GTCAGCACGA TTGACGATGA AGTCAAGTGC
GCCATCAGCC GCCTGGGCAA CGAGTTGCGC GTGGCCGGAA CGATTGAAAT CGGTGGCTAC
GATTTGTCGC TCGACACGCC GGTGGCCAAG GCCAGGTGCC ACATGCTGGC CAGGCGCATC
GAGGAAGTGC TGCCCGGCGT GTGCGACACG CGGCTCGAAG AAGAAGGCGG CCAGCCGCAG
TTCTGGACCG GCCTGCGCCC GGCCACGCCG ACCAACATCC CCTACATCGG CAAGACCAAG
GTCGATAGGC TGTGGGTCAA CGCCGGCCAC GGCACGCTGG GCTGGACGCA CGGCGCGGGT
TCGGGCAAGG CCATGGCCGA ACTCCTCAGC GGCGAAGTGC CGGCCATGGC TTTCGGCTTT
TACGGCTTTG ACCGCACCCG CCGCCAGCCG GGGCTGTCGG TCGCCTGA
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| Protein sequence | MKVVVLGAGI IGVSTAWHLL ERGHEVTVVD RQPDAALETS FANAAQISVS YCEPWANRDA
PLKALKWMLR DDAPLLFRPR LPFGEGWQQW RWGLQFLAQC NDAAFERNVQ QLVALGAYSH
AALKDVVRAT GIEYNRLERG IAHYYTEQKS FDTAGDAAAL MRKYGVARRV VSTAELLKIE
PAFSAFADRI VGGTYTASDE SGDARVFTQA LAQRCAERGV QFLYSHDVVR LEKTGNAINS
VAIRARGTSI KGQNDAKVTP LTQLKADAVV VACGSYTAPL LRTVGVDLPI YPGKGYSATF
KLLKPELAPF VSTIDDEVKC AISRLGNELR VAGTIEIGGY DLSLDTPVAK ARCHMLARRI
EEVLPGVCDT RLEEEGGQPQ FWTGLRPATP TNIPYIGKTK VDRLWVNAGH GTLGWTHGAG
SGKAMAELLS GEVPAMAFGF YGFDRTRRQP GLSVA
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