| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0074 |
|---|
| Symbol | |
|---|
| ID | 4689973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 77560 |
|---|
| End bp | 78861 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639833068 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_980321 |
|---|
| Protein GI | 121602992 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCA CCCGCCAATG GCTGCTGGGC GCGGGCGTTG CCGCAGGCAT GCTGGCCCTG
CTGGCGGCGC TGCTGCTCAG CCTGGTTCCT TCGGATGAGG AACTGGCCGC TCGCGCCTCC
GCCGAGCTGG AGGCGGCGCT GGGCGTTCCG GTCCGCGTCG GCGCGCTGCA CTGGCGCCTG
AGGCCCACGC CCACGGTGGT CATCGAGGAG GTCGCCACCG GCCAGCCCCA GCCGATTGAA
ATCAAAAGGC TCACCGCCCA TCTCAACACC TCCGCGCTCT GGCAACGCCG CATGAAGGTG
GACCTGGCCG TCGTGCAGGG CGCCGTGCTG CCGCAGCTGT CACTGCGCGG ACTGGGCCGC
AAGCCCGCAG CGGCAGAGGC CGGGCCGGCG CGCGAATTCA CGCTGGACGA GGTGCCGATG
GCGCGCATCG AGTTTGGCGA TGTCACCTGG ATTTCGCGCC ACGGCATTCG CGTGGTGTAC
GAAGGGGAGG CGGATTTCGA TGCCGCCTGG CGGCCGCGCA CGGCCCGGCT TCGCCGTCCG
CAAACCAGTC CGCCCGCCGA CCTGGCGCTG GCCCGCAAGG GGCAAGACGA CCGCTGGGAA
GTGCGCAGCC ACATCGGCGG CGGAACGGCT GATGGCGAGC TGCTGCTGCA CACCAGCGGC
CAGGGCGGCC TGCGCCTCAC GGGCCAGCTC CAGCCGCGCC ATATCGAGGT GGCCAGCGCC
TTGCAGGCCT TCAACCGCCG CGCCATCATC GCGGGCAAGG CGTCGGGCGA AACCACGCTG
TCGGCCAGCG GCGCCACGGC GGGCGAATTG GCCCGGTCGC TGCATACCAC CACGTCGTTC
AGCATGGGCC GCTCGACGCT GCTGCGCTTT GACCTGGACA AGGCCATTCG CAGCCTCGGC
CAGGCGCATG CGGGGCAAAC CCCGCTGGAT TCCGTCACCG GCCAGATCGA CACCCAGAAC
ACGCCGCAAG GCATGGTGGT GACCTTCAGC CGGCTGCAAG CCCGCTCGGG CGCATTCAGC
GCATCGGGCA AGGCGCGCGT TGCCGAGCTG CGCATTCAGG CCGAACTGGC GGTTGACCTG
GTCGATGGTG TGGTCGGCGT GCCCTTGACG CTCAGCGGTC CGCTGGACAA GGTCCAGGTG
TCGGTGCCGG CCAGCGCCCT GGCCGGCGCC GCCGCCGGAA CCGCCGTGCT GCCGGGCATC
GGCACGGCGA TAGGCGCGCG GATCGGGGCG GCCATCGGCA AGCTGTTCGG TTCGGAGCCC
GAGCCCGCCG CCGGGCCGCG TCCCGCGCCC GGCAAGCAGT GA
|
|---|
| Protein sequence | MTRTRQWLLG AGVAAGMLAL LAALLLSLVP SDEELAARAS AELEAALGVP VRVGALHWRL
RPTPTVVIEE VATGQPQPIE IKRLTAHLNT SALWQRRMKV DLAVVQGAVL PQLSLRGLGR
KPAAAEAGPA REFTLDEVPM ARIEFGDVTW ISRHGIRVVY EGEADFDAAW RPRTARLRRP
QTSPPADLAL ARKGQDDRWE VRSHIGGGTA DGELLLHTSG QGGLRLTGQL QPRHIEVASA
LQAFNRRAII AGKASGETTL SASGATAGEL ARSLHTTTSF SMGRSTLLRF DLDKAIRSLG
QAHAGQTPLD SVTGQIDTQN TPQGMVVTFS RLQARSGAFS ASGKARVAEL RIQAELAVDL
VDGVVGVPLT LSGPLDKVQV SVPASALAGA AAGTAVLPGI GTAIGARIGA AIGKLFGSEP
EPAAGPRPAP GKQ
|
|---|
| |