| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0071 |
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| Symbol | |
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| ID | 4687579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 73873 |
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| End bp | 74817 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639833065 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_980318 |
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| Protein GI | 121602989 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.16172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTTC AGCAACTGCG CTCCGTGCGC GAAACCGTGC GCTGCGGCTT CAACCTGACC
GACGTGGCCA CCGCGCTGCA CACCTCGCAG CCCGGCGTGA GCCGGCAGAT CCGCGAGCTG
GAGGAAGAAA TCGGCATCGA GCTGTTCGTT CGCGCCGGCA AGCGCCTGAC CGGACTGACC
GAGCCGGGCG CGCATGTGCT GCCCATCGTC GAGCGGCTGC TGCTCGAATG CAGCAACCTG
AAAAAAGCCG GCCAGGAATA CATGGCGCAG CAAAACGGCC TGCTGTCGAT TGCCGCCACC
CATTCGCAGG CGCGCTATGC GCTGCCGCCG GCGGTGCAGG AGTTTCGCGC GCAGTTTCCC
CATGTGAAGC TGCACCTGCA CCAGGGCTCG CCCAAGCAGG TCGCCGAGAT GCTGCTGTCG
GGCGAGGTCG ATGTCGGTAT TGCCACCGAA GCGCTCAATG GCTACCCGGA GCTGGTCGCC
CTGCCCTGCT ACCGCTGGAC GCATTCGGTG ATCGTGCCGC CCGGCCACGC CTTGCTGAGT
GGCCCGCTCA CGCTGGAGCG ACTGGCGCAG TTTGCCCTGA TCACCTACGA CAACGGCTTT
ACCGGCCGCA CCCACATCGA CCAGGCTTTT GCCCAGCACC AGCTGATGCC CAACATCGTG
CTGACGGCGA TGGATGCCGA CGTCATCAAG ACCTATGTCG AACTCGGCAT GGGCGTGGGC
ATCGTGGCGT CGATTGCCTA CGAAGCCGAA CGCGACACGG CGCTGCGGGC GCTGGATGCC
GGCGCGCTGT TCGGCATCAA CCTGACCAAG CTGGCGGTGC GGCGCGGCAG CTATCTGCGC
AGCTACGTGT ATGCGTTCAT CGAGTCGTTC GCGCCGACGC TGAACCGGGC CATCGTCGAG
CAGACTTTGA GCGGCGCGCC AGGCGGCGAC CATTACGACA TCTAG
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| Protein sequence | MNFQQLRSVR ETVRCGFNLT DVATALHTSQ PGVSRQIREL EEEIGIELFV RAGKRLTGLT
EPGAHVLPIV ERLLLECSNL KKAGQEYMAQ QNGLLSIAAT HSQARYALPP AVQEFRAQFP
HVKLHLHQGS PKQVAEMLLS GEVDVGIATE ALNGYPELVA LPCYRWTHSV IVPPGHALLS
GPLTLERLAQ FALITYDNGF TGRTHIDQAF AQHQLMPNIV LTAMDADVIK TYVELGMGVG
IVASIAYEAE RDTALRALDA GALFGINLTK LAVRRGSYLR SYVYAFIESF APTLNRAIVE
QTLSGAPGGD HYDI
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