Gene Pnap_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0060 
Symbol 
ID4689872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp63703 
End bp64887 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content67% 
IMG OID639833054 
Productbeta-ketothiolase 
Protein accessionYP_980307 
Protein GI121602978 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.629911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTG AAGTAGTAGT TGTCAGCGGT GTGCGCACCG CCATTGGAAC CTTTGGCGGC 
AGCCTGAAAG ACACGCCGCC CACCGAGCTG GCCGCGCTGG TCGTTCGTGA ATCGCTCGCG
CGCGCCGGCG TCGAGGGCAA GGATGTCGGC CATGTGGTGT TCGGCCATGT CGTCAACACC
GAAGCCAAGG ACATGTACCT GTCGCGCGTG GCAGCCGTCA ACGGCGGCTG CGCCGAAGGC
ACGCCCGCGT TCAACGTCAA CCGCCTGTGC GGCTCGGGCC TGCAGGCCAT CATCTCGGCC
AGCCAGAGCA TTTTGCTCGG CGACGCGGAC ATCGCCATTG GCGGCGGCGC CGAAAACATG
AGCCGCGGCC CCTACGCCAG CCTGGCCACG CGCTTTGGCG CGCGCCTGGG CGACAGCAAG
CTGGTCGACA TGGTGGTCGG TGCGCTGCAT GACCCGTTCC ACACCATCCA CATGGGCGTG
ACGGCCGAGA ACATCGCCGC CAAGTGGGGC ATCACGCGCG AGGAGCAGGA CGCGCTGGCC
GTGCAGAGCC ACAACCGCGC CCAGAAGGCG ATTGAAGCAG GCTACTTCAA GGAGCAGATC
GTGCCGGTGA TGCTCAAGAG CCGCAAGGGC GAAGTGGCGT ATGACACCGA CGAGCATTTC
CGCCCGAACT GCACGCTGGC CGACATGGCC AAGCTGAAAC CCGTGTTCGT CAAGGAAAAC
GGCACGGTGA CGGCTGGCAA CGCCTCGGGC ATCAACGACG CGGCCGCTGC CGTGGTCTTG
ATGGAAGCCG GCGTTGCCGA GGCGCGCGGC CTCAAGCCCC TGGCCCGTCT GGTCGCCTAC
GCGCATGCCG GCGTCGATCC GAAATACATG GGCATCGGCC CGGTCCCGGC CACCCAGATG
GCGCTGAAAA AAGCCGGCCT CACGGTCAAT GACCTGGACG TGATCGAGGC CAACGAGGCG
TTCGCCGCCC AGGCCTGCGC CGTCACGCGC GACCTGGGGC TCGACCCGGC CAAGGTCAAT
CCGAACGGCT CGGGCATCTC GCTGGGCCAC CCGATTGGCG CGACCGGCGC CCTGATCACC
GTCAAGGCGC TGCACGAGCT CAAGCGCATC CAGGGCCGCT ACGCGCTGGT GACGATGTGC
ATCGGCGGCG GCCAGGGCAT CGCGGCGATT TTCGAGCGGA TGTAA
 
Protein sequence
MTREVVVVSG VRTAIGTFGG SLKDTPPTEL AALVVRESLA RAGVEGKDVG HVVFGHVVNT 
EAKDMYLSRV AAVNGGCAEG TPAFNVNRLC GSGLQAIISA SQSILLGDAD IAIGGGAENM
SRGPYASLAT RFGARLGDSK LVDMVVGALH DPFHTIHMGV TAENIAAKWG ITREEQDALA
VQSHNRAQKA IEAGYFKEQI VPVMLKSRKG EVAYDTDEHF RPNCTLADMA KLKPVFVKEN
GTVTAGNASG INDAAAAVVL MEAGVAEARG LKPLARLVAY AHAGVDPKYM GIGPVPATQM
ALKKAGLTVN DLDVIEANEA FAAQACAVTR DLGLDPAKVN PNGSGISLGH PIGATGALIT
VKALHELKRI QGRYALVTMC IGGGQGIAAI FERM