| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0057 |
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| Symbol | |
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| ID | 4689776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 58751 |
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| End bp | 59677 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639833051 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_980304 |
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| Protein GI | 121602975 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.620754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.137866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGCCCG CCTACATCAC CCATCCCGAT TGCGCCCTCC ACGAAATGGG TGCCCACCAT
CCCGAATGCC CCGAGCGTCT GGGCGCCATC AACGACATGC TGCTGGTCAA GGGCCTGCTC
GACTACATGC ATCCCTACGA TGCGCCGCTG GCCACGCCGG AGCAGCTGGC CCATGCGCAT
TCCTCGCTGT ATGTCAGCGA ACTCATGGCG GCCTCCCCGG CGGAGGGCTA CCACAAGGTC
GATCCCGACA CCGACATGAA CCCGTTCACC GTGCGGGCGG CATTGCGCGC GGCCGGCTCC
GTGGTGCTGG CCACCGACCT GGTGCTGACG GGCGATGCAC CGAGCGCTTT TTGCTGCGTG
CGCCCGCCCG GCCACCATGC GCAGCGCGAC GCCGCCATGG GCTTTTGCTT TTTCAACAAC
GTCGCCGTCG GCATCCGCCA TGCGCTGACG CAGCACGGCC TGCAGCGCGT CGCGCTGATT
GATTTCGACG TGCACCACGG CAACGGCAGC GAGGACATCT TTCGCGGCGA CGAGCGGGTG
CTGATGTGCT CGATCTTCGA GCAGGGCATC TACCCGTTCA CCGGCGAAAA CGCCACGGGT
CCGAATATGG TCAATGTCGG CCTGCCCTCG CGCTCGGGCA GCGACAAGTT CCGCGAAGCC
GTCACCAGCC ACTGGCTGCC CGCGCTGGAC GCCTTCAAGC CCGAGCTGAT CTATGTGTCG
GCCGGCTTTG ACGGCCACCG CGAGGACGAC ATGGGCAACC TGGCCCTGGT CGAGGCCGAC
TACGAATGGG TTACCAAAAA AATCATGGCG GTGGCCGAGC GCCATTGCCA GGGCCGCGTC
ATCTCGTGCC TGGAAGGCGG TTACGTCCTG AGCCCACTCG CGCGCAGTGT TGCCGCGCAT
GTCAAGGTGC TGATTGGCGC CGACTGA
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| Protein sequence | MLPAYITHPD CALHEMGAHH PECPERLGAI NDMLLVKGLL DYMHPYDAPL ATPEQLAHAH
SSLYVSELMA ASPAEGYHKV DPDTDMNPFT VRAALRAAGS VVLATDLVLT GDAPSAFCCV
RPPGHHAQRD AAMGFCFFNN VAVGIRHALT QHGLQRVALI DFDVHHGNGS EDIFRGDERV
LMCSIFEQGI YPFTGENATG PNMVNVGLPS RSGSDKFREA VTSHWLPALD AFKPELIYVS
AGFDGHREDD MGNLALVEAD YEWVTKKIMA VAERHCQGRV ISCLEGGYVL SPLARSVAAH
VKVLIGAD
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