| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0054 |
|---|
| Symbol | |
|---|
| ID | 4689836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 54110 |
|---|
| End bp | 55105 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639833048 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_980301 |
|---|
| Protein GI | 121602972 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.16835 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCATG TCCTGACCCT TGCTGCTGCC TCTGCCATGC TTGTTGCCTG CGGTGGTGGC
AGCGACTCGG CCCCTGCGGC CACGCCCACT CCGGCTGCAA CGCAAGCCAC CCTGACTTCT
GCCAACTACG TGGCGGTCGC CCAGGAATCG CTGTCGTCTT CTGCTTACCT CGCCAACACA
ACTGGCCTTG TCACAGGCGC TCAAGTCAGC GATTCCGAGG CACTGATCCG TTTTGGCCAG
GACCAGCTTC CCAAGCTGCC GCGCTGGCTG GCCGATGCGC CCGTGCAGGC GGTTGGCGCC
GTGCAGAGCC AGACTGAAAA CTGCGCGGGC GGCGGCACGC TGACCATTTC AGCGAACGAC
GCCAACGGCA ATCGCCTGGT GGATGCAGGC GATTCGGTCT CCCTGACGGC AAACAACTGC
TCGTTCGAAG GCCAGTTGTT GAACGGTCAA TTGACCCTGA CCATCAACAG CTTGACCGGC
AATCCTGACC ATTACCCCTA CAGTTTGTCG GTCACCCTCG GCTTCAACAA TCTGGCGACG
CAATCCGCGT CATTGCGCAC CGTTGGAAAC GGCAGCCTTG CCTTGTCCAT CGATGCACGC
GCCGCCAACG ACCAGTCGCT GGTGCTGCGC ACTTCCAGCC TGAACCTTTC ATCGACTTAC
GGCACCACCA CTTACAGCAA AACGCTAACC GGCTATGCGA CTTCCGTGGA GTTGCGCCCC
GCAGGCACCG GTTTCACCTC CACCACCTCG GTGGACGGAA CGCTGAGCAG CTCGGCCTTC
GAGTCCAGAA GCATCAGCAT CGCCACGCCG GTTTCTTTCG TCAGGACAAG CGGGCAGACT
TACCCCAGCA GCGGCCAGCT CGTCATCACC GGCGCGGCAG GCGGCAAGAT CCGAGTCACT
GTCACCAGCG CCACCACGGT GCTGATCGAG CTGGATGCGG ACGCCAACGG CAGCTACGAA
GCGTCCACGA GCAAGCTCTG GAGCGACATG CTTTGA
|
|---|
| Protein sequence | MRHVLTLAAA SAMLVACGGG SDSAPAATPT PAATQATLTS ANYVAVAQES LSSSAYLANT
TGLVTGAQVS DSEALIRFGQ DQLPKLPRWL ADAPVQAVGA VQSQTENCAG GGTLTISAND
ANGNRLVDAG DSVSLTANNC SFEGQLLNGQ LTLTINSLTG NPDHYPYSLS VTLGFNNLAT
QSASLRTVGN GSLALSIDAR AANDQSLVLR TSSLNLSSTY GTTTYSKTLT GYATSVELRP
AGTGFTSTTS VDGTLSSSAF ESRSISIATP VSFVRTSGQT YPSSGQLVIT GAAGGKIRVT
VTSATTVLIE LDADANGSYE ASTSKLWSDM L
|
|---|
| |