Gene Pnap_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0053 
Symbol 
ID4689824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp52725 
End bp54020 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content64% 
IMG OID639833047 
Productacetyl-CoA hydrolase/transferase 
Protein accessionYP_980300 
Protein GI121602971 
COG category[C] Energy production and conversion 
COG ID[COG0427] Acetyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.123416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTAC AGACCCTTTA TCAGCAAAAA CGCATGTCGG CCGCCGACGC CATTGGCGTC 
GTCATGAACG GCGACACGGT GGTGGTGCCC ACCGCCGTGG GCGAGCCGCC GGCCCTGCTG
ACGGCGCTCT CGGATGCGCG CCGCGAGTTC CGCAACGTGA GCGTTTCGCA AATCCTGCCG
GTGCGCAAGT ACGGCTACTT TGACCCCGAC ACGACCGCGC ATGTCCGCCA TGTCGCCTAC
TTTTTCAGCG GCATCTCGCG CGCTGGCGGG CAGGAGGGCT GGACGGATTT CATTTCGGCC
AATTTCTCCG AACTGCCGGA CCTGCTCAAT CGCAAGCTGA TTCCGGCCGA TGTGGTGTTT
TCCATGGCGT CGCCGATGGA CGAGCACGGC TTTTTCTCGC TGTCGCTGGC GCCCGACTAC
ACCATGGCCG CAATCGCGCA GGCCCGGGCC GTGGTGCTGG AGGTCAACCC CAACGTGCCG
TTTGCCAATG GCAACTGCCA CATCCACGTC TCGCAGGTCA CCGCGCTGAC CGAAAGCGAG
GACGCGCTGC TTGAAGTCGG GCTGCCCAAG ATCGGCCCGG TGCAGGAAGC CATCGGCAAG
TACGTCGCCG ACATGATCCC GGACGGCGCG ACGCTGCAGA TCGGCTACGG CGGCATTCCC
GACGCGGTGG TCATGCAGCT GACGCACAAG CACGACCTGG GCGTGCACAC CGAAATGATC
GGCGACGGCA TCATGACGCT GGTCGAGGCC GGCGCCGTCA CCAACCGCAA GAAGAATTAT
TTGCCCGGCA AGATGCTGGC GACCTTCGCC CTGGGTTCGA ACAAGCTGTA TCAGTTTTTG
CACCGCAACC CAGCGGTCGA GATGCATCCG GTCGGCTTCA CCAACGACCC CTACCTGGCC
GGCCAGAACG ACAACCTGCA TGCCATCAAT GCGACGATGC AGATCGACTT CATGGGCCAG
TGCGGCTCGG AAAGCCTGGG GTTCACGCCG TATTCGGGCA CCGGCGGGCA AACCGATTTC
GTGCGCGCGG CGAATCGCTC GAACGGCGGC AAGGCCTTCA TCGTGCTGCC CTCGACCGCC
AAGCACGACA CCATTTCGCG CATTGTGCCG GTGCTCTCGC CCGGCACGCA TGTCAGCACC
AGCAAGAACG ACATCAACTA CGTGGTGACC GAATTCGGCG TGGCCCAGCT GCGCGGCAAG
ACCGCCCAGC AGCGCTGCGA GGCGCTGATC GCCATCGCGC ACCCGGACTT TCGCGGCGAG
TTGCGCGATG CGGCCAAAAG GATGAAGCTG CTTTGA
 
Protein sequence
MSVQTLYQQK RMSAADAIGV VMNGDTVVVP TAVGEPPALL TALSDARREF RNVSVSQILP 
VRKYGYFDPD TTAHVRHVAY FFSGISRAGG QEGWTDFISA NFSELPDLLN RKLIPADVVF
SMASPMDEHG FFSLSLAPDY TMAAIAQARA VVLEVNPNVP FANGNCHIHV SQVTALTESE
DALLEVGLPK IGPVQEAIGK YVADMIPDGA TLQIGYGGIP DAVVMQLTHK HDLGVHTEMI
GDGIMTLVEA GAVTNRKKNY LPGKMLATFA LGSNKLYQFL HRNPAVEMHP VGFTNDPYLA
GQNDNLHAIN ATMQIDFMGQ CGSESLGFTP YSGTGGQTDF VRAANRSNGG KAFIVLPSTA
KHDTISRIVP VLSPGTHVST SKNDINYVVT EFGVAQLRGK TAQQRCEALI AIAHPDFRGE
LRDAAKRMKL L