| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0044 |
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| Symbol | |
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| ID | 4689329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 44646 |
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| End bp | 45938 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639833038 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_980291 |
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| Protein GI | 121602962 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.520063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.383909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG AAGGCCTCGC TTTCATCGTT TTTTCAGCCG GCATGCTGCT GCTCATGGGC
ATCGGCATGA ACATGGGCCT GGCGCTGGTG CTGACCGGCG CCGGCATGGC CGCCGTGCTC
GGCTTCTGGG ACACCCAGCT GCTGGCGCAA AACCTGGTCG CCGGCGTGGA CAGCTTTCCG
CTGCTGGCCG TGCCATTTTT TATCCTGGCC GGCGAGCTGA TGAACTCGGG CGGCATCAGC
AGCCGCATCA TCGCCATGGC GCAGGCCTGG GTCGGCCACA TTCGCGGCGG GCTGGGCTTC
GTGGCGATTG CCGCGGCCGT GATGATGGCC AGCATGAGCG GCTCGGCGCT GGCCGACACC
GCCGCGCTGG CGACCATCCT GCTGCCGATG ATGCGCCAGC AGGGCTACCC GATGCACACC
TCGGCCGGCC TGATTGCCTC GGGCGGCATC ATCGCGCCCA TCATTCCGCC GTCCATGCCC
TTCGTGATCT ACGGCGTGAC CACCAATACG TCGATCTCGG CGCTGTTCAT CTCGGGCATC
GTGCCGGGCA TCATCATGGG CATCGGCCTG ATCATTGCGT GGAAACTGGT GCTGCGCAAG
ATGGACCTGC CGCAAGGCCA GCCGCTGCCC ATGAAGGAAC GGCTGCGCGC CACCGCCAAG
GCTTTCTGGG CCATGCTGAT GCCGATCATC ATCATCGGCG GCATGAAAAC CGGCATCTTC
ACGCCGACCG AAGCGGCCGT GGTGGCCGCG TTCTACGCGC TGTTCGTCGC CCTGTTCGTG
CACCGCGAGA TGAAGCTGGC CGAGATCCAC GGCGTGCTGG TGCGCGCGGG CAAGACCACC
GCCATCGTCA TGTTTTTGTG CGCCGGCGCC CAAGTAGCGA GCTACATGAT CACGCTGGCC
GACCTGCCGG GCACGCTCAC CGGCTGGCTC GGCCCGCTGG TCGAAAGCCC CAAGCTCTTG
ATGGCCGTGA TGATGATCGT GCTGGTCATC GTCGGCACGG CGCTGGACCT GACGCCGACG
ATTTTGATCT TCGCGCCGGT GATGCTGCCG ATTGCGGTCA AGGCCGGCAT CGACCCGGTG
TACTTCGGCC TGATGTTCGT GCTCAACGGC GCGATCGGCC TGATCACGCC GCCCGTGGGC
ACCGTGCTCA ACGTGGTGGC CGGCGTCGGC CGGATGCCGC TGCACCGGGT GATCCAGGGG
GTCAACCCTT TTCTCATCAC CTATGTGCTG ATCCTTGTCA TGTTCGTCAT CTTTCCCCAG
ATCGTCACCG CGCCCGTCGC GTGGATGCGC TAA
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| Protein sequence | MSNEGLAFIV FSAGMLLLMG IGMNMGLALV LTGAGMAAVL GFWDTQLLAQ NLVAGVDSFP
LLAVPFFILA GELMNSGGIS SRIIAMAQAW VGHIRGGLGF VAIAAAVMMA SMSGSALADT
AALATILLPM MRQQGYPMHT SAGLIASGGI IAPIIPPSMP FVIYGVTTNT SISALFISGI
VPGIIMGIGL IIAWKLVLRK MDLPQGQPLP MKERLRATAK AFWAMLMPII IIGGMKTGIF
TPTEAAVVAA FYALFVALFV HREMKLAEIH GVLVRAGKTT AIVMFLCAGA QVASYMITLA
DLPGTLTGWL GPLVESPKLL MAVMMIVLVI VGTALDLTPT ILIFAPVMLP IAVKAGIDPV
YFGLMFVLNG AIGLITPPVG TVLNVVAGVG RMPLHRVIQG VNPFLITYVL ILVMFVIFPQ
IVTAPVAWMR
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