| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0030 |
|---|
| Symbol | |
|---|
| ID | 4687106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 29057 |
|---|
| End bp | 29905 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639833024 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_980277 |
|---|
| Protein GI | 121602948 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.815374 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.380288 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCCC GGCAGCTTTT TTTACGCCTT CGCCAACGCC CCGACACGCG GGCGGCGCGA
CACGCAAGCG CTACCATAGC GGCCATGCTC AACAAGCCCC GCATCCTGGT CGTCGAAGAC
GAATCCGGCA TCGCCGACAC GCTGCAATAT GTGCTGTCCA CCGATGGCTT CGCGCCGGTC
TGGTGCAGCA CCGCCGGGCA GGCGCTGCGC GAATTTTCGG CCGGGTTGCC GGCGCTGGTC
ATCCTCGATA TCGGCCTGCC CGACCTCAAC GGCTTCGAGC TGTTCAAGCG CCTGCAGGCC
TTGCCCGGCG GCGCGCAGGT GCCGATGCTG TTTTTGACCG CGCGCAGCGA CGAGATCGAC
CGCGTGGTGG GGCTGGAACT GGGCGCCGAC GACTACATCG CCAAACCCTT TTCGCCGCGC
GAACTGGTGG CCAGAGTGCG CGGCATCCTG CGCCGCAGCG TGCGCCAGCC GCTGGCTGCG
CCACTGCCCG AGCCGCCGCA ACCGGCGTCA GGCGCCACGC CCATGGCGGT CCGCATGGAA
GCCGCCGCCA CGCCGTTCGC GCTCGATGAA GAGCGCCGCC AGATTCGCTT TTACGGCCGG
GTGCTGGAGC TGTCGCGCTA CGAATACGGC ATCCTGCGGC TGCTGGTGCT CAGGCCCGGC
CGCGTCTTCA CGCGCGACGA GCTGTTCGAC CAGGTGTGGA CGGATGGCAG CGGCAGCCTG
GACCGCACGA TTGACGCGCA CATCAAGACC CTGCGCGCCA AGCTCAAGGC CGTGGCGCCG
CACGCCGAGC CGATACGCAC CTCGCGCGGC TCGGGCTACG CGCTGAGCGA AGCGCTGCCA
GCGGCGTGA
|
|---|
| Protein sequence | MTARQLFLRL RQRPDTRAAR HASATIAAML NKPRILVVED ESGIADTLQY VLSTDGFAPV
WCSTAGQALR EFSAGLPALV ILDIGLPDLN GFELFKRLQA LPGGAQVPML FLTARSDEID
RVVGLELGAD DYIAKPFSPR ELVARVRGIL RRSVRQPLAA PLPEPPQPAS GATPMAVRME
AAATPFALDE ERRQIRFYGR VLELSRYEYG ILRLLVLRPG RVFTRDELFD QVWTDGSGSL
DRTIDAHIKT LRAKLKAVAP HAEPIRTSRG SGYALSEALP AA
|
|---|
| |