| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0028 |
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| Symbol | |
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| ID | 4687104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 25129 |
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| End bp | 27234 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639833022 |
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| Product | vault protein inter-alpha-trypsin subunit |
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| Protein accession | YP_980275 |
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| Protein GI | 121602946 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.880979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.680993 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTCAC CACTTTCCCC CAATGCCCGC GCCGCGCGCT GGCTCTGGCT TGCCACCGCC
AGCCTGGCGA CGGTCTGTTT CATCGCGCTG TCGGCCAGCC CCGCGCAGGC GCAGGACAAC
GGCAGCGCGC CCCGGCTGAA AACCGAAAGC CCGTACTTCT TCGTCAAGAG CGACACGCCC
GGCGTGGACG CGCTGCCGCT CAAATCCACC TCGGTCGATG TGCAGATTTC CGGCGTGATT
GCCGATGTCA CCGTCACCCA GCGCTACAAA AACGAAGGCC AGCGCGCCAT CGAGGCGCGC
TATGTCTTTC CCGCCTCGAC GCGCGCCGCC GTCTATGGCA TGAACGTGCG GCTGGCCGAC
CGCCTGATCA CCGCCAACAT CCGCGAAAAG CAGCAGGCGC GCATCGAATA CGACGCCGCC
AGGAACGAAG GCAAGACCGC CGCGCTGCTG GAGCAGCACC TGCCCAACGT GTTCGAGATG
AACGTCGCCA ACATCCTGCC CGGCGACGAC GTGAAGGTGG AATTGCGCTA CACCGAACTG
TTGGTGCCGC AGTCGGGCGC TTACCAGTTC GTCTTTCCCA CGGTGGTCGG CCCGCGCTAC
AACAGCGCGC AATCCAGCCA GGCGCTGGCT CAATGGGTAG CCCAGCCCTT CTTGCCAGCG
GGTCAGGCGT CGGCGACGGC GTTTGACATC AAGGTCAAGC TGGCCACGCC CATCGGCATC
AAGGAAGTGT CTTCCCACTC GCACAGCATC GACGTGACCA AGGACGGCGA CGAACGCGCC
GCCGTTTCCT TGCGCAGCGG CGATAAGCCC GGCAACAACC GCGACTTCAT CCTCGACTAC
CGGCTGGCCG GCGAGCGCAT CGAGTCGGGC GTGATGCTGT ATCAGGGCAC GCCGGGCAAT
GGCGCCAGCG GCGAGAACTT CTTCCTCGCC ATGATCGAGC CGCCCAAGCA GGTCGCGGCG
CAGGCCATCA GCCCACGCGA CTACATCTTC GTCGTCGATA TCTCGGGCTC GATGCACGGC
TTTCCGCTCG ACACGGCCAA GACCTTGATG CGCGAGCTGA TCGGCAAGCT GCGCCCCAGC
GACACCTTCA ACGTGCTGCT GTTCTCGGGC AGCAACCGCT TCCTGAGCCC CGCATCGGTC
CCCGCCACGC AGGCCAATAT CGAGCAGGCG GTGCGCACCA TCGACGAAAT GGGCGGCGGT
GGCGGCACCG AACTGATTCC GGCGCTCAAG CGCGTGTATG CCGAACCCAA GGCGGCCGAC
GTGTCGCGCA CCGTGGTCGT GGTGACCGAC GGCTTCGTCA CCGTCGAGCG CGAAGCCTTC
GAGCTGGTGC GGCGCAACCT GTCGCAGGCG AACCTGTTTT CATTCGGCAT CGGCTCGTCG
GTCAACCGCC ACCTGATGGA AGGCCTGGCG CGCGCCGGCA TGGGCGAGCC CTTCATCATC
ACCGAGCCAT CGCAGGCCAG GGCCCAGGCC GAGCGCTTTC GCCGGCTGAT CGAGTCGCCG
GTGCTGACCA GCGTGAAGCT GCGCTTCGAG GGCCTGGACG TGTATGACGT GGAGCCCGCG
CAACTGCCCG ACGTGCTGGG CGAGCGCCCG GTGGTGGTGT TTGGCAAATG GCGCGGCACG
CCAGCGGGCC AGGTCATCAT CGACGGCCAG AGCGCCACCG GCCCGTACCG CAATGCCGTG
ACCGTGCCAG CGCAAAACGG CCAGAACACG GCCGCGCTGC GCTACCTTTG GGCACGCCAC
CGCATCGCCA GCCTGTCGGA CCAGGAAGCG CTCGAAGGCG GCGACGCGCA CCGCCAGCGC
ATCACCGAGC TGGGCCTGCA GTACAACCTG CTGACGCAGT ACACCAGCTT CCTGGCGGTG
GACCAGGTGG TGCGCAACCT GCAGCCGCAG GACGCTACCG GCGTGAACCA GCCTTCGCCG
CTGCCGCAGG GCGTGAGCAA CCTGGCGGTG GGCGAAGTGT CCATCGGCGC CGCAGTGCCC
GGCACGCCCG AGCCCGCCAC CTGGGGCGCG GTGCTGGTGC TGCTGTCGGT GCTGGCCCTG
CTGGCGCGGC GCGAGCGCAG GGCGTCGCGC GGCAGGCCGG GTAGCGCCGC CCGCTTCACC
GCCTGA
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| Protein sequence | MESPLSPNAR AARWLWLATA SLATVCFIAL SASPAQAQDN GSAPRLKTES PYFFVKSDTP
GVDALPLKST SVDVQISGVI ADVTVTQRYK NEGQRAIEAR YVFPASTRAA VYGMNVRLAD
RLITANIREK QQARIEYDAA RNEGKTAALL EQHLPNVFEM NVANILPGDD VKVELRYTEL
LVPQSGAYQF VFPTVVGPRY NSAQSSQALA QWVAQPFLPA GQASATAFDI KVKLATPIGI
KEVSSHSHSI DVTKDGDERA AVSLRSGDKP GNNRDFILDY RLAGERIESG VMLYQGTPGN
GASGENFFLA MIEPPKQVAA QAISPRDYIF VVDISGSMHG FPLDTAKTLM RELIGKLRPS
DTFNVLLFSG SNRFLSPASV PATQANIEQA VRTIDEMGGG GGTELIPALK RVYAEPKAAD
VSRTVVVVTD GFVTVEREAF ELVRRNLSQA NLFSFGIGSS VNRHLMEGLA RAGMGEPFII
TEPSQARAQA ERFRRLIESP VLTSVKLRFE GLDVYDVEPA QLPDVLGERP VVVFGKWRGT
PAGQVIIDGQ SATGPYRNAV TVPAQNGQNT AALRYLWARH RIASLSDQEA LEGGDAHRQR
ITELGLQYNL LTQYTSFLAV DQVVRNLQPQ DATGVNQPSP LPQGVSNLAV GEVSIGAAVP
GTPEPATWGA VLVLLSVLAL LARRERRASR GRPGSAARFT A
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