| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0023 |
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| Symbol | |
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| ID | 4687098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 21038 |
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| End bp | 21679 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639833017 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_980270 |
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| Protein GI | 121602941 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.564168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.364212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCTT CCGCGCCTTT TGCCCCCCTG ACCGGCCCCA TCGGCTTTTA CCCCGTGGTG
CATGACGCCG CCTGGGTCCA GCGCCTGCTC GGCTGGGGCG TGCGCACGGT GCAGCTGCGC
TTCAAAGCCG CTGGCCACAC GCCGGCCGAG ATCGAACGCG AAGTGAACGC CGCCGTCGAG
GCCGGCAGCA AAGTGCCGGG CGCGCAGGTG TTCATCAACG ACCACTGGCA ACTCGCCCTA
GCCGCCGGCG CCTACGGCGT GCACCTGGGC CAGGAAGACC TGGACACGGC CGACATCGAA
GCCCTGCGCA ACGCAGGCCT GCGGCTGGGC CTGAGCACGC ACACGCCGGC CGAACTGGCG
CGCGCCCATG CGGTGCAGCC GTCCTATCTG GCGATTGGCC CGATCTACCC GACGACGCTG
AAAGTCATGC CTTACGCGCC GGTCGGACTG ACGCAATTGA AGGAATGGGC CACGCTGGCC
GTGCCGTATC CGGTGGTGGC GATTGGCGGC ATTTCGCTGG AGCGCCTGCC CGGCGTGCTG
GCCTGCGGCG TCGATGGCGT GGCGGTGGTC AGCGCGGTGA CGCTGGCGGC TAACCCGCAG
CAGGCGGCGC TGCAAGGGCT TGCGCTGGTT GGGAAACGCT GA
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| Protein sequence | MTASAPFAPL TGPIGFYPVV HDAAWVQRLL GWGVRTVQLR FKAAGHTPAE IEREVNAAVE
AGSKVPGAQV FINDHWQLAL AAGAYGVHLG QEDLDTADIE ALRNAGLRLG LSTHTPAELA
RAHAVQPSYL AIGPIYPTTL KVMPYAPVGL TQLKEWATLA VPYPVVAIGG ISLERLPGVL
ACGVDGVAVV SAVTLAANPQ QAALQGLALV GKR
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