Gene Pnap_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0013 
Symbol 
ID4687087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp10635 
End bp11936 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content67% 
IMG OID639833007 
Productcardiolipin synthase 2 
Protein accessionYP_980260 
Protein GI121602931 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.282981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCT GGGTCAGCGG CAACTCGTTT CAGTTGCTGG AAAACGGCGA GGCGTTTTTC 
CCGCGCGTTT TTGAATGCAT CGCCGCTGCC CGGAACGAGG TGGTGCTCGA AACCTTCATT
TTGTTCGAGG ACAAGGTCGG CCTGGCGCTG CATGCGGCGC TGCTGCAGGC GGCTTCGCGC
GGCGTGCGGA TCGATGTCAC GGTGGACGGC TTCGGCTCGC CCGACCTGTC GCCCGGCTTC
ATCTCGGCCC TGACGCAGGC CGGCGTGCGC GTGCATGTGT TCGACCCCGC CCCCCGGCTC
TGGGGCTGGC GCACGAATGT CTTCAGGCGC ATGCACCGCA AGATCGTGGT CGTCGATGGC
CAGCGCGCCT TTGTCGGCGG CATCAATTAT TCGGCCGACC ACCTGGCCGA CTTCGGCCCC
GAGGCCAAGC AGGACTACGC GGTCGAGGTC ATTGGCCCCA TCGTTGCGGA AATTCACGCG
TTCGTGCACC AGGCGCTGGC CGCCGGGCAG CAGGGCACGG CCAAAAGCCT GGGCGGCCAG
CTGCGCGAGC GCTTTGCCGA CCGCGCGCAG CGCCTGGCGC AGCGCTGGCG CCAGGCTCCC
GGGCCGGCAG GCGACGCAGC GGCGATTTTC GTCACCCGCG ACAACCGCCT GCACACCACC
GACATCGAGC GGCATTACCG CATCGCCATT CGCGCCGCCA GGCAGCGCGT GGTGATTGCC
AACGCCTATT TTTTCCCGGG TTTCCGGCTG CTCAATGAAA TGCGCAAGGC GGCGCGGCGC
GGCGTCGAGG TCAAGCTGAT CCTGCAGGGC GAGCCCGACA TGGCGATTGT CAAGACGGCG
GCCAACATGC TGTACCACCA CCTGCTGTCG GCCGGTGTGC AGATCTTTGA ATACTGCGAG
CGGCCGCTGC ACGGCAAGGT GGCGGTGTCC GACGACGAAT GGGCCACGGT GGGCTCCAGC
AACCTGGACC CGCTCAGCCT GTCGCTGAAC CTGGAGGCCA ACGTCATCAT CAAGGACCGC
GCCTTCAACC AGCATTTAAG CGCGCGGCTG GCCCACCTGA TGGACAACAG CTGCAAGCAG
ATCAGGCAGG GCGACCTGGA GGAGTCCACC TGGTGGCGCG TGGTGCGCAG CTTCTTTGTG
TTTCACCTGC TCAGCCGCTT TCCGGCCTGG GCCGGCTGGC TGCCCGCGCA CACGCCGCGC
CTGATGCTGG CGACGGTGCC CACCGATACC GCCGACAGCG CCGACAGCGC CGGCGCCGAC
CGCGTCAGCC AGGCCGACCC GGTTGGCGCC GCTGATGCCT GA
 
Protein sequence
MTRWVSGNSF QLLENGEAFF PRVFECIAAA RNEVVLETFI LFEDKVGLAL HAALLQAASR 
GVRIDVTVDG FGSPDLSPGF ISALTQAGVR VHVFDPAPRL WGWRTNVFRR MHRKIVVVDG
QRAFVGGINY SADHLADFGP EAKQDYAVEV IGPIVAEIHA FVHQALAAGQ QGTAKSLGGQ
LRERFADRAQ RLAQRWRQAP GPAGDAAAIF VTRDNRLHTT DIERHYRIAI RAARQRVVIA
NAYFFPGFRL LNEMRKAARR GVEVKLILQG EPDMAIVKTA ANMLYHHLLS AGVQIFEYCE
RPLHGKVAVS DDEWATVGSS NLDPLSLSLN LEANVIIKDR AFNQHLSARL AHLMDNSCKQ
IRQGDLEEST WWRVVRSFFV FHLLSRFPAW AGWLPAHTPR LMLATVPTDT ADSADSAGAD
RVSQADPVGA ADA