Gene Pnap_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0011 
Symbol 
ID4687085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp9140 
End bp9574 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content69% 
IMG OID639833005 
Producthypothetical protein 
Protein accessionYP_980258 
Protein GI121602929 
COG category[R] General function prediction only 
COG ID[COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.243646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACG ATCCCGCCAT CCATGTCCTG AGGCTGAACC CCGGCGACGA CCTGCGCGCC 
GAACTGCAAT CGGCCTTCAA CGCGCTGCAG GCCCGGGGCT GCCGGGCCGC CTGCGTCATC
TCGGCCGTCG GCAGCCTGTC GCGCGCCGTG CTGCGCCATG CGGCCCAGGC GCAGGCAAGC
GTGCAGAACG AGCCGCTGGA ACTCATCACC CTGTCGGGCA CGCTGAGCCC GGACGGCGTG
CACCTGCATG CCAGCGTCGC CGATGCCCGG GGCGAAATGC GCGGCGGTCA TGTCATGCCG
GGCTGCAGCG TTCGCACCAC GGCTGAAATC GTGCTGGCGC TGCTGCCGGG CTGGGCGTTC
AGCCGCGCGC ACGATGATCG GAGCGGCTTC ATGGAGCTGG TGGCGACGCC CGCCAGCTCA
AAAAATCCAG ACTGA
 
Protein sequence
MNNDPAIHVL RLNPGDDLRA ELQSAFNALQ ARGCRAACVI SAVGSLSRAV LRHAAQAQAS 
VQNEPLELIT LSGTLSPDGV HLHASVADAR GEMRGGHVMP GCSVRTTAEI VLALLPGWAF
SRAHDDRSGF MELVATPASS KNPD