Gene Pnap_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0003 
Symbol 
ID4687079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3701 
End bp4522 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content59% 
IMG OID639832997 
Producthypothetical protein 
Protein accessionYP_980250 
Protein GI121602921 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.179185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGGCTAT TGCGCAAAAG GCTTTTTTTG ATGATAAAAA AGGCCAAACA TCGGCGTTTC 
CCGTGCGCTG ATTCGGCCGG CGCTCAACTC ATAATCACCT GGTTGGCTGC GGGAGGTTCC
GCAAGCCTGG CAAGGCGGGC AATACGGCTT GCTTCTAAAA GCACAAGGAA CTGCAGCATG
GGACTGATGG ACCGGGATTA CATGCATGAA AAATCCCGGC GTCAACGGCC GTTCAGCCCG
CCGCCCGAGC GGTTCAAGCT GGGCACCTTG GGCATGGCGC TTGTCTTTGT GGCGCTGCTG
TTTTTTCTCT ACAAGGCAGC CGACTGGAAA CTGAACCAAC GCCCAGCACC TCAGCCTGTT
GCCGAGTCAA TGCCCCAGCC AGCCCGGCAT CCAATCCCAG CGCCAGCCCT TCCAACGCAG
CCCGCCTACC CAAACAGTTC CAACGCGGCA GCGGGCATTT CCCAAGTGAC CAAGTGCGTG
GTGAACGGCC GCACCAGCTA CGGCGACGCC GCATGCCCGC AAGGATCGAT CAGCAGCCAG
GTCACCACGC GAGCCAATCA CAACCTGATG GCGGCCGTCC GGCCAACAGC CGCCGGCCCA
GCCGAAGCAA CTGCAACTGC AACGGCCCAA CACATCGTTG AAGTGCAAGC CAGTTCTTTC
AACGACGCTG CGGCCAAAAA AACGGAATGC GATTGGCTCG ATTCGCAAAT CAAGCACTGG
GATTCCATGG CGCGCCAACC GCAAGGCGCG CAAACGCAAG ACTGGATCAG GGAGCAGCGC
AAGCAGGCGC GCGACCGACA GTTTCGGATT CATTGCCGGT AA
 
Protein sequence
MWLLRKRLFL MIKKAKHRRF PCADSAGAQL IITWLAAGGS ASLARRAIRL ASKSTRNCSM 
GLMDRDYMHE KSRRQRPFSP PPERFKLGTL GMALVFVALL FFLYKAADWK LNQRPAPQPV
AESMPQPARH PIPAPALPTQ PAYPNSSNAA AGISQVTKCV VNGRTSYGDA ACPQGSISSQ
VTTRANHNLM AAVRPTAAGP AEATATATAQ HIVEVQASSF NDAAAKKTEC DWLDSQIKHW
DSMARQPQGA QTQDWIREQR KQARDRQFRI HCR