| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_5024 |
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| Symbol | |
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| ID | 4690254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008771 |
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| Strand | - |
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| Start bp | 10145 |
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| End bp | 11128 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639832965 |
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| Product | TrbL/VirB6 plasmid conjugal transfer protein |
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| Protein accession | YP_980121 |
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| Protein GI | 121583599 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.001184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGAAG CAGCGCCAAT TACTTGGCTT GTCGGTGAAA TAAACAAGAT TGTGAGTTCT
GGCGCTGGTT CCGCCGCATC AGCCATTGCC ACGGCGGTAA CGCCCCTGGC TGCGGTTGGC
TTCGGTATTT ACATCATCCT GATCTGCATC AATTACATGC GCGGCGCAGA GACTGAGCCT
GTAATTGATT TTGGCGTTCG GTGCGCGGGT TTCGCTGTGA TTATTGGCCT GGGCTTGAAT
GCCGCGAACT ACACCAGCAC GGTTATTCCT ATCGTGACTG GCGTAGGCAG TGATTTGGCT
TCGGCGGTCA GCGGTGGCAG CGCCTCCGCT GGCACGTTAG ACCAACTCGC CCTCCACTAC
CTGAAGATTC TTGATGATGG CTACGAATCG GCCAGCAGCA GCGGATTTCC ATGGAATGCG
GGTTCCATGC TCCTGTATTT CATGAAATAC ACATGCATCC TGGTCGGCCT GATTCCGTTC
CTGGTTGCAG CAACGATTGC AATCATCATT GCTGATGTTG GCTCTGTCTT GGTCGCCATG
ATCGGGCCGC TGTTTTTCGC CTTCCTGATA TTTCCCGCGA CACGGCAATA TTTCTCGGCC
TGGCTCAACA CAGCGTTGAG CTATGCCCTG ATTCCCGTGT TCGTGGCGGT GATTGCCACC
ATATCCGTGG GTCTTTCAAA AACCATGCTT TCCGGCAGTG GCTCGCTTGA TGACGTGTCG
TTGAAAGCGG TGTTCCTTGC ATCAATGGGC AATCTGACGC TGCTATTCCT TTTGAAACAG
GTGAGTGCCC TGGCGTCGTC CCTGAGCGCG GGCGGTATCA ATGCCTCAAT GCCGGGGAGC
ATAGGCACGC TGGTAAGTGC CATCAAAGGC TCCGCAAAGG ACATAAAGGC CATGCAGGCC
GGTTATCGCG CCACCAAAGC CGATGGCCAA GCAGTTGGCC GCTGGGCGGC AAACAAATTC
AATTCGATCA GGAAAGCAGG CTAA
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| Protein sequence | MDEAAPITWL VGEINKIVSS GAGSAASAIA TAVTPLAAVG FGIYIILICI NYMRGAETEP
VIDFGVRCAG FAVIIGLGLN AANYTSTVIP IVTGVGSDLA SAVSGGSASA GTLDQLALHY
LKILDDGYES ASSSGFPWNA GSMLLYFMKY TCILVGLIPF LVAATIAIII ADVGSVLVAM
IGPLFFAFLI FPATRQYFSA WLNTALSYAL IPVFVAVIAT ISVGLSKTML SGSGSLDDVS
LKAVFLASMG NLTLLFLLKQ VSALASSLSA GGINASMPGS IGTLVSAIKG SAKDIKAMQA
GYRATKADGQ AVGRWAANKF NSIRKAG
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