Gene Veis_5021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_5021 
Symbol 
ID4690244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008771 
Strand
Start bp7282 
End bp8634 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content60% 
IMG OID639832962 
Productconjugation TrbI family protein 
Protein accessionYP_980118 
Protein GI121583596 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2948] Type IV secretory pathway, VirB10 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.553821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGA CTACCGATTT CACAAACGTG GGCGCATTGC CCACGTTGGA CACTGAACCC 
GAGGTTTTGG GCGAGCCGAC CAGCAAAGCA AAGTCCAAAA CGAATGTGGG CAAATTCGCC
ATCCTTGGCC TGGTGCTTGT GGGGTTCCTG TTTATCGTGG CCGGGCTTTT GTTCTACCAA
AAGCACAAGC GGGCGAATGC AACCGTGGAG ACACCGGCCA AGACTGCGCC GGTGAAGCCT
GAATTTGCGT CGAAGAATGC GGCGGTCGAG AGTGATTTAA TTGAGAAGGC AAAGGCCGAA
ATCAAGAAGA AGGAAGAGGA AGATCAAGCC CAAATCAAGG CCGTAGAAGA GGCTCAGGCG
CAAGCGAAGG CCCAGGCCGC AGCCGAGGCC GCAAAACGCG GCCAAGGCGG TTTTGGCCAG
GCTGACGGGC AACAACGCGG CGGGCAGTAC AGCGGTGGCC AGGCGCAGCA GGGCAACCAG
CCACCTCCCC CACCCACGCC GATGGAACGC AAGATGGCGG GCGGCGTGCT CCTGGACAGC
AAGGGCGCGA AGCCCAAGGC TGATGCGCAG TTGTCCGAAA AGGAACAGCA GCAACGCGAA
GTGCAAGCCC GTATGGCGGC GGCTGGCGTG ACTCCGGGCG GTGGCCAGGG CTTCAATGGT
GGAACTGGCC TGCAGCTCGC GCCTGGTGGC CAGGGCGGGG GCGCTGATGG GCTTGCGGCC
CGGCTGCAAC CTACGGTCTT GCAAGCCCGC TGGGCGGGCA AGCTGCCCAA CCTAGACTAC
CTGTTGAAGC GCGGCACCAC GATTCCTTGC GCGCTGAAAA CCGGCATTGA TACGACGCTG
CCCGGCTTCG TCATTTGCAA GGTGCTCAAC AACGTGTACT CGGCCAATGG CAAGGTGTTG
TTGGTCGAGC GCGGGGCAGA CGTGTTCGGT GAGCAGCAAT CGCAGCTCAA GCAAGGCCAG
GAACGAACCT TCGTTGTCTG GACGCGCATC GACAACCCCA ACGGGGTGTT TGCCAACATC
GACAGCCCGG CGACTGACCA AATGGGCTAC AGCGGTATTC CCGGCTACGT TGACACCCAC
TTTTGGCAGC GGTTCGGCGG CGCAATCATG CTGAGCCTGA TTAAGGACTT TTCACAAGCC
TACTCGCAGC GCGTGGCGAA TAGCAGCAAC ACGGGCGCGA CGGCTGCACA GCCGTACTCA
AACACCAATC AGGCCACCCA AGATATGGCC GCTGAGGCGT TGCGCAATTC GATCAACATC
CCACCCACTT TGGTGGTGCT TCCCGCGACG ATTGTAAACG TCATGGTGGC GCGTGACGTG
AGCTTTGAAA ATGTCTTTAA CGTTGTTGAG TGA
 
Protein sequence
MSETTDFTNV GALPTLDTEP EVLGEPTSKA KSKTNVGKFA ILGLVLVGFL FIVAGLLFYQ 
KHKRANATVE TPAKTAPVKP EFASKNAAVE SDLIEKAKAE IKKKEEEDQA QIKAVEEAQA
QAKAQAAAEA AKRGQGGFGQ ADGQQRGGQY SGGQAQQGNQ PPPPPTPMER KMAGGVLLDS
KGAKPKADAQ LSEKEQQQRE VQARMAAAGV TPGGGQGFNG GTGLQLAPGG QGGGADGLAA
RLQPTVLQAR WAGKLPNLDY LLKRGTTIPC ALKTGIDTTL PGFVICKVLN NVYSANGKVL
LVERGADVFG EQQSQLKQGQ ERTFVVWTRI DNPNGVFANI DSPATDQMGY SGIPGYVDTH
FWQRFGGAIM LSLIKDFSQA YSQRVANSSN TGATAAQPYS NTNQATQDMA AEALRNSINI
PPTLVVLPAT IVNVMVARDV SFENVFNVVE