Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_5021 |
Symbol | |
ID | 4690244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008771 |
Strand | - |
Start bp | 7282 |
End bp | 8634 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639832962 |
Product | conjugation TrbI family protein |
Protein accession | YP_980118 |
Protein GI | 121583596 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.553821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGAGA CTACCGATTT CACAAACGTG GGCGCATTGC CCACGTTGGA CACTGAACCC GAGGTTTTGG GCGAGCCGAC CAGCAAAGCA AAGTCCAAAA CGAATGTGGG CAAATTCGCC ATCCTTGGCC TGGTGCTTGT GGGGTTCCTG TTTATCGTGG CCGGGCTTTT GTTCTACCAA AAGCACAAGC GGGCGAATGC AACCGTGGAG ACACCGGCCA AGACTGCGCC GGTGAAGCCT GAATTTGCGT CGAAGAATGC GGCGGTCGAG AGTGATTTAA TTGAGAAGGC AAAGGCCGAA ATCAAGAAGA AGGAAGAGGA AGATCAAGCC CAAATCAAGG CCGTAGAAGA GGCTCAGGCG CAAGCGAAGG CCCAGGCCGC AGCCGAGGCC GCAAAACGCG GCCAAGGCGG TTTTGGCCAG GCTGACGGGC AACAACGCGG CGGGCAGTAC AGCGGTGGCC AGGCGCAGCA GGGCAACCAG CCACCTCCCC CACCCACGCC GATGGAACGC AAGATGGCGG GCGGCGTGCT CCTGGACAGC AAGGGCGCGA AGCCCAAGGC TGATGCGCAG TTGTCCGAAA AGGAACAGCA GCAACGCGAA GTGCAAGCCC GTATGGCGGC GGCTGGCGTG ACTCCGGGCG GTGGCCAGGG CTTCAATGGT GGAACTGGCC TGCAGCTCGC GCCTGGTGGC CAGGGCGGGG GCGCTGATGG GCTTGCGGCC CGGCTGCAAC CTACGGTCTT GCAAGCCCGC TGGGCGGGCA AGCTGCCCAA CCTAGACTAC CTGTTGAAGC GCGGCACCAC GATTCCTTGC GCGCTGAAAA CCGGCATTGA TACGACGCTG CCCGGCTTCG TCATTTGCAA GGTGCTCAAC AACGTGTACT CGGCCAATGG CAAGGTGTTG TTGGTCGAGC GCGGGGCAGA CGTGTTCGGT GAGCAGCAAT CGCAGCTCAA GCAAGGCCAG GAACGAACCT TCGTTGTCTG GACGCGCATC GACAACCCCA ACGGGGTGTT TGCCAACATC GACAGCCCGG CGACTGACCA AATGGGCTAC AGCGGTATTC CCGGCTACGT TGACACCCAC TTTTGGCAGC GGTTCGGCGG CGCAATCATG CTGAGCCTGA TTAAGGACTT TTCACAAGCC TACTCGCAGC GCGTGGCGAA TAGCAGCAAC ACGGGCGCGA CGGCTGCACA GCCGTACTCA AACACCAATC AGGCCACCCA AGATATGGCC GCTGAGGCGT TGCGCAATTC GATCAACATC CCACCCACTT TGGTGGTGCT TCCCGCGACG ATTGTAAACG TCATGGTGGC GCGTGACGTG AGCTTTGAAA ATGTCTTTAA CGTTGTTGAG TGA
|
Protein sequence | MSETTDFTNV GALPTLDTEP EVLGEPTSKA KSKTNVGKFA ILGLVLVGFL FIVAGLLFYQ KHKRANATVE TPAKTAPVKP EFASKNAAVE SDLIEKAKAE IKKKEEEDQA QIKAVEEAQA QAKAQAAAEA AKRGQGGFGQ ADGQQRGGQY SGGQAQQGNQ PPPPPTPMER KMAGGVLLDS KGAKPKADAQ LSEKEQQQRE VQARMAAAGV TPGGGQGFNG GTGLQLAPGG QGGGADGLAA RLQPTVLQAR WAGKLPNLDY LLKRGTTIPC ALKTGIDTTL PGFVICKVLN NVYSANGKVL LVERGADVFG EQQSQLKQGQ ERTFVVWTRI DNPNGVFANI DSPATDQMGY SGIPGYVDTH FWQRFGGAIM LSLIKDFSQA YSQRVANSSN TGATAAQPYS NTNQATQDMA AEALRNSINI PPTLVVLPAT IVNVMVARDV SFENVFNVVE
|
| |